RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PLPP2O43688 288 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 TPST2O60704 377 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SNNO75324 88 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SERPINA5P05154 406 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 ETS2P15036 469 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 HOXB9P17482 250 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 LIMS1P48059 325 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 POLR2JP52435 117 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 RGS8P57771 180 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 GLO1Q04760 184 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 RBBP4Q09028 425 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 FADDQ13158 208 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 MELKQ14680 651 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 OR1Q1Q15612 314 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 GCNT6Q5T4J0 391 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 FAM91A1Q658Y4 838 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 ACSM5Q6NUN0 579 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 ULK3Q6PHR2 472 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 DHRS4L2Q6PKH6 230 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 WDR88Q6ZMY6 472 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 CBLL1Q75N03 491 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 MAVSQ7Z434 540 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 MEGF8Q7Z7M0 2845 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SNX32Q86XE0 403 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 CPOQ8IVL8 374 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC22A24Q8N4F4 322 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 C10orf53Q8N6V4 93 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 NKAIN3Q8N8D7 197 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 ZDHHC22Q8N966 263 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 ICA1LQ8NDH6 482 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC30A7Q8NEW0 376 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 OR4M2Q8NGB6 313 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 OR6S1Q8NH40 331 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SNX33Q8WV41 574 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 C22orf15Q8WYQ4 148 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 GTF2H4Q92759 462 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 UBE2FQ969M7 185 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 RAB39BQ96DA2 213 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC47A1Q96FL8 570 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 CLPTM1LQ96KA5 538 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 OR52B2Q96RD2 323 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 JMJD8Q96S16 334 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 EPYCQ99645 322 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SH3GL3Q99963 347 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 WFDC6Q9BQY6 131 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 CHCHD6Q9BRQ6 235 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SUCNR1Q9BXA5 334 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 RAD21L1Q9H4I0 556 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 DENND2DQ9H6A0 471 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC52A3Q9NQ40 469 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 HINT3Q9NQE9 182 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SDR39U1Q9NRG7 319 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 MRPL39Q9NYK5 338 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC25A37Q9NYZ2 338 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 SELENONQ9NZV5 590 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 FBLN5Q9UBX5 448 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 FBXL3Q9UKT7 428 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 WIPI2Q9Y4P8 454 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 PPIAL4AQ9Y536 164 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 PCDHGB1Q9Y5G3 927 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 CACNG2Q9Y698 323 aa6.63□□□□□ -1.35
SMCHD1-210ENST00000583800 TRRAPQ9Y4A5 3859 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 IGLV3-9A0A075B6K5 115 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 IGHV1-69-2A0A0G2JMI3 117 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 F5H0A9 414 aaPredicted RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 UBDO15205 165 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 BCL10O95999 233 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 IGHV2-5P01817 119 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 F13BP05160 661 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 LCKP06239 509 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 ADORA3P0DMS8 318 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 ANPEPP15144 967 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 AQP1P29972 269 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 CDH12P55289 794 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 KLF3P57682 345 aaPredicted RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 UBA52P62987 128 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 CDK6Q00534 326 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 ZP4Q12836 540 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 HNRNPA0Q13151 305 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 TSTQ16762 297 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 TNFAIP8L3Q5GJ75 292 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 CEP85LQ5SZL2 805 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 HHATQ5VTY9 493 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 DCAF12L2Q5VW00 463 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM154Q6P9G4 183 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 USP51Q70EK9 711 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC35D2Q76EJ3 337 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 PIWIL3Q7Z3Z3 882 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 PXKQ7Z7A4 578 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 MSRB3Q8IXL7 192 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 BPIFB2Q8N4F0 458 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 MREGQ8N565 214 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 TEX29Q8N6K0 151 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 OR5J2Q8NH18 312 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 SYNPRQ8TBG9 265 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM54Q969K7 222 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 NMD3Q96D46 503 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 RNF121Q9H920 327 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM27Q9HBJ8 222 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 CDH20Q9HBT6 801 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms