RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	LIPE	Q05469	1076 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	C17orf67	Q0P5P2	114 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	POU4F2	Q12837	409 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ILF2	Q12905	390 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	KIR3DS1	Q14943	382 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	KIAA0040	Q15053	153 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CNN3	Q15417	329 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	LRRC75B	Q2VPJ9	315 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	LINC01559	Q495D7	138 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	TIGD2	Q4W5G0	525 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	PDCD4	Q53EL6	469 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	SOHLH1	Q5JUK2	328 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	C6orf136	Q5SQH8	315 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	TSPO2	Q5TGU0	170 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	PTRHD1	Q6GMV3	140 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	SLC2A7	Q6PXP3	512 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	TBPL2	Q6SJ96	375 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DLEU7	Q6UYE1	221 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	NPSR1	Q6W5P4	371 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	GPRIN3	Q6ZVF9	776 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	GOLGA7	Q7Z5G4	137 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	AQP12A	Q8IXF9	295 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	MSRB3	Q8IXL7	192 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	RIMKLA	Q8IXN7	391 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ZDHHC23	Q8IYP9	409 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CBR4	Q8N4T8	237 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CDYL2	Q8N8U2	506 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ACOT4	Q8N9L9	421 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	PCYOX1L	Q8NBM8	494 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ZFP28	Q8NHY6	868 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DUSP19	Q8WTR2	217 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	BCL2L2	Q92843	193 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	NEIL2	Q969S2	332 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	EME1	Q96AY2	570 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	NMD3	Q96D46	503 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DGCR14	Q96DF8	476 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	NEIL1	Q96FI4	390 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	MPP4	Q96JB8	637 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	C17orf77	Q96MU5	243 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	OR5M11	Q96RB7	305 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DCLRE1C	Q96SD1	692 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF382	Q96SR6	550 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	PRPF18	Q99633	342 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	SSX3	Q99909	188 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ATF6B	Q99941	703 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	HOPX	Q9BPY8	73 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM79	Q9BSE2	394 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772		Q9H521	79 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ZFP57	Q9NU63	452 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	GID8	Q9NWU2	228 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DCAF16	Q9NXF7	216 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	NUDT4	Q9NZJ9	180 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	CD274	Q9NZQ7	290 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ACTR3B	Q9P1U1	418 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	UPB1	Q9UBR1	384 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF639	Q9UID6	485 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	DUSP13	Q9UII6	198 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772	COMMD3-BMI1	R4GMX3	469 aa		3.89	□□□□□ -1.79
MSI2-216	ENST00000582772		A0A1W2PRB8	838 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	SYCE1L	A8MT33	242 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	LSM1	O15116	133 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	ANGPT2	O15123	496 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	TPD52L2	O43399	206 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	SPRY3	O43610	288 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	EFNA2	O43921	213 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	TPST1	O60507	370 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	PLOD3	O60568	738 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	PRAMEF4	O60810	478 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	H6PD	O95479	791 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	C1QC	P02747	245 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	IGF1	P05019	195 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	CT45A8	P0DMV1	189 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	CT45A9	P0DMV2	189 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	IDO1	P14902	403 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	SPN	P16150	400 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	EPOR	P19235	508 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	ATP5A1	P25705	553 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	PITPNB	P48739	271 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	HSPA7	P48741	367 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	TTPA	P49638	278 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	POLR2J	P52435	117 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	XG	P55808	180 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	KLF3	P57682	345 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	IL2	P60568	153 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	ADARB1	P78563	741 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	EMX2	Q04743	252 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	TGM3	Q08188	693 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	BNIP2	Q12982	314 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	NAE1	Q13564	534 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	TGFBI	Q15582	683 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	LY6E	Q16553	131 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM95	Q3KNT9	176 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF260	Q3ZCT1	412 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	GTDC1	Q4AE62	458 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	CT45A2	Q5DJT8	189 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	COQ5	Q5HYK3	327 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	KHDC1L	Q5JSQ8	128 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	INTS11	Q5TA45	600 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	PRAMEF9	Q5VWM5	478 aa		3.88	□□□□□ -1.79
MSI2-216	ENST00000582772	WDR25	Q64LD2	544 aa	Predicted RBP	3.88	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms