RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TIGD4Q8IY51 512 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 SLC22A24Q8N4F4 322 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 OR1K1Q8NGR3 316 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 SMAP2Q8WU79 429 aaPredicted RBP8.36□□□□□ -1.07
RFFL-210ENST00000582308 WDR76Q9H967 626 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 MARCH7Q9H992 704 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 SIAEQ9HAT2 523 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 EMC7Q9NPA0 242 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 GALNT8Q9NY28 637 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 HAO2Q9NYQ3 351 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.36□□□□□ -1.07
RFFL-210ENST00000582308 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
RFFL-210ENST00000582308 SPTAN1Q13813 2472 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 CIB4A0PJX0 185 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 NKX2-6A6NCS4 301 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 SLC1A7O00341 560 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 ZNF593O00488 134 aaPredicted RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 RAD51DO75771 328 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 APOL3O95236 402 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 HLA-DQA2P01906 255 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 HRGP04196 525 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 MRPL3P09001 348 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 RNF224P0DH78 156 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 OR8G3PP0DMU2 310 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 DBTP11182 482 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 NPR2P20594 1047 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 PSMB1P20618 241 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 AGAP20933 346 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 MSR1P21757 451 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 CD79BP40259 229 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 NAA10P41227 235 aaPredicted RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 MTNR1AP48039 350 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 BLVRAP53004 296 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 HCCSP53701 268 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 CXCR4P61073 352 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 TGFBR3Q03167 851 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 GGTLC2Q14390 218 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 NRN1LQ496H8 165 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 HIKESHIQ53FT3 197 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 LCN1P1Q5VSP4 162 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 FAM27BQ5VT28 67 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 KRT80Q6KB66 452 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 BHLHA15Q7RTS1 189 aaPredicted RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 ERI1Q8IV48 349 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 SKA3Q8IX90 412 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 LRRC18Q8N456 261 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 ZNF808Q8N4W9 903 aaPredicted RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 WDR31Q8NA23 367 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 C1orf162Q8NEQ5 155 aaPredicted RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 BPIFB6Q8NFQ5 453 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 OR4F15Q8NGB8 312 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 FGFBP3Q8TAT2 258 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 CA5BP1Q8WTZ4 195 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 LGALS12Q96DT0 336 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 RNFT2Q96EX2 444 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 INTS14Q96SY0 518 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 SH3GL3Q99963 347 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 RHNO1Q9BSD3 238 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 ZNF416Q9BWM5 594 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 ADGRL4Q9HBW9 690 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 PLCXD1Q9NUJ7 323 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 MRPS18AQ9NVS2 196 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 ELOVL5Q9NYP7 299 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 ZNF224Q9NZL3 707 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 LRCH1Q9Y2L9 728 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 RPL36Q9Y3U8 105 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 LHFPL6Q9Y693 200 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 COMMD3-BMI1R4GMX3 469 aa8.35□□□□□ -1.07
RFFL-210ENST00000582308 HELZ2Q9BYK8 2649 aaKnown RBP8.35□□□□□ -1.07
RFFL-210ENST00000582308 TENM4Q6N022 2769 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 WIPF3A6NGB9 483 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 SNTNA6NMZ2 147 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 J3QKU1 62 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 J3QRE1 110 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 FAM20BO75063 409 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 ADRA2AP08913 450 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 CST2P09228 141 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 SBK2P0C263 348 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 PATE4P0C8F1 98 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
RFFL-210ENST00000582308 CCKARP32238 428 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 UGT2B10P36537 528 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 RPS27P42677 84 aaKnown RBP8.34□□□□□ -1.07
RFFL-210ENST00000582308 GUCA1AP43080 201 aaPredicted RBP8.34□□□□□ -1.07
RFFL-210ENST00000582308 ENTPD1P49961 510 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
RFFL-210ENST00000582308 CSNK2BP67870 215 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 TUBA1BP68363 451 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 TUBA4AP68366 448 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 ADAM8P78325 824 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 TFF3Q07654 80 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 PCK2Q16822 640 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 TBRG1Q3YBR2 411 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 TEX30Q5JUR7 227 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 OR7E24Q6IFN5 339 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 CORO6Q6QEF8 472 aa8.34□□□□□ -1.07
RFFL-210ENST00000582308 TUBA1AQ71U36 451 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms