RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MTNR1AP48039 350 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 CDH11P55287 796 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 FOXG1P55316 489 aaPredicted RBP13.62□□□□□ -0.23
SS18-216ENST00000580751 RAB40BQ12829 278 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 TSC22D1Q15714 1073 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 PHYHD1Q5SRE7 291 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 C1QTNF12Q5T7M4 302 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 RNLSQ5VYX0 342 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 PLBD1Q6P4A8 553 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 LEG1Q6P5S2 330 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 LINGO2Q7L985 606 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 SYT14Q8NB59 555 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 RASD2Q96D21 266 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 DACH2Q96NX9 599 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 RBP7Q96R05 134 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 KCNN3Q9UGI6 736 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 OR6C68A6NDL8 312 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 TRIM64CA6NLI5 447 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 ARHGEF9O43307 516 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 RPSAP08865 295 aaKnown RBP13.61□□□□□ -0.23
SS18-216ENST00000580751 QDPRP09417 244 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 DBTP11182 482 aaKnown RBP13.61□□□□□ -0.23
SS18-216ENST00000580751 SLC2A5P22732 501 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 FMO3P31513 532 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 SNTB1Q13884 538 aaKnown RBP13.61□□□□□ -0.23
SS18-216ENST00000580751 GGTLC2Q14390 218 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 GABRA6Q16445 453 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 TIMM23BQ5SRD1 257 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 THEM4Q5T1C6 240 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 ANKRD16Q6P6B7 361 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 KLHL24Q6TFL4 600 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 EGFL6Q8IUX8 553 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 ZNF540Q8NDQ6 660 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 SDR9C7Q8NEX9 313 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 TSPAN14Q8NG11 270 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 OR1K1Q8NGR3 316 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 MCHR2Q969V1 340 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 BOD1Q96IK1 185 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 MYCBPQ99417 103 aaPredicted RBP13.61□□□□□ -0.23
SS18-216ENST00000580751 TEAD3Q99594 435 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 DNAJC27Q9NZQ0 273 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 CRIM1Q9NZV1 1036 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 SCOCQ9UIL1 159 aa13.61□□□□□ -0.23
SS18-216ENST00000580751 SLC22A23A1A5C7 686 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 M0R129 80 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 DHHO43323 396 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 FADS2O95864 444 aaKnown RBP13.6□□□□□ -0.23
SS18-216ENST00000580751 EPXP11678 715 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 COL8A1P27658 744 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 ZNF84P51523 738 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 ZNF133P52736 654 aaPredicted RBP13.6□□□□□ -0.23
SS18-216ENST00000580751 ARF1P84077 181 aaKnown RBP13.6□□□□□ -0.23
SS18-216ENST00000580751 ZNF91Q05481 1191 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 SMN1Q16637 294 aaKnown RBP13.6□□□□□ -0.23
SS18-216ENST00000580751 C10orf128Q5T292 105 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 LRFN4Q6PJG9 635 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 ZNF773Q6PK81 442 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 ZNF627Q7L945 461 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 PRSS48Q7RTY5 328 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 LINC01560Q8TB33 94 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 NMD3Q96D46 503 aaKnown RBP13.6□□□□□ -0.23
SS18-216ENST00000580751 MUCL1Q96DR8 90 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 WFIKKN1Q96NZ8 548 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 MNTQ99583 582 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 FOXB1Q99853 325 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 COPS4Q9BT78 406 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 RACGAP1Q9H0H5 632 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 FGF20Q9NP95 211 aaPredicted RBP13.6□□□□□ -0.23
SS18-216ENST00000580751 OBP2BQ9NPH6 170 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 INPP5EQ9NRR6 644 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 AMDHD2Q9Y303 409 aa13.6□□□□□ -0.23
SS18-216ENST00000580751 FAM183AA6NL82 134 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 H7C1C5 153 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 CASKO14936 926 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 RGS10O43665 173 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 XPNPEP2O43895 674 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 GLCEO94923 617 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
SS18-216ENST00000580751 SPI1P17947 270 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 EEF1B2P24534 225 aaKnown RBP13.59□□□□□ -0.23
SS18-216ENST00000580751 DCKP27707 260 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 LCN6P62502 163 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 MVKQ03426 396 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 FMODQ06828 376 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 TAB1Q15750 504 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 TBRG1Q3YBR2 411 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 NRN1LQ496H8 165 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 SVOPQ8N4V2 548 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 CYB561A3Q8NBI2 242 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 GGHQ92820 318 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 ZNF837Q96EG3 531 aaPredicted RBP13.59□□□□□ -0.23
SS18-216ENST00000580751 SIGLEC11Q96RL6 698 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 CDCA4Q9BXL8 241 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms