RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SEC14L5O43304 696 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 AKR7A2O43488 359 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PLPP2O43688 288 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TRIM3O75382 744 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 B3GALNT1O75752 331 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TRAPPC6AO75865 159 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 APOBEC1P41238 236 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CDKN2AP42771 156 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 EVX1P49640 407 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GZMKP49863 264 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SUMO3P55854 103 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RPS4XP62701 263 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TATDN3Q17R31 274 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TMEM176BQ3YBM2 270 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 JMJD6Q6NYC1 403 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 POMGNT2Q8NAT1 580 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF511Q8NB15 262 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DEDD2Q8WXF8 326 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 UPRTQ96BW1 309 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 IP6K3Q96PC2 410 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF552Q9H707 407 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 C12orf10Q9HB07 376 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GRHPRQ9UBQ7 328 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FREM3P0C091 2139 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 H3BSH0 61 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 AKR7A3O95154 331 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR2T7P0C7T2 308 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 EDNRAP25101 427 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SRP9P49458 86 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GBX2P52951 348 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MYBPHQ13203 477 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ACSM3Q53FZ2 586 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OTPQ5XKR4 325 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SAMD12Q8N8I0 201 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GDPD1Q8N9F7 314 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 C19orf18Q8NEA5 215 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR2T27Q8NH04 317 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 C5orf34Q96MH7 638 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR5B2Q96R09 309 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 EXTL2Q9UBQ6 330 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 COPS3Q9UNS2 423 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RASD1Q9Y272 281 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HIF3AQ9Y2N7 669 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TRBV2A0A0J9YWF9 115 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR2M5A3KFT3 312 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ARPC3O15145 178 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ARHGEF9O43307 516 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 AHSA1O95433 338 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 EIF4EP06730 217 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CD14P08571 375 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CELA3AP09093 270 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MTNR1BP49286 362 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DIO1P49895 249 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GDI2P50395 445 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 AGFG1P52594 562 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SNRPD2P62316 118 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ACTA2P62736 377 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ACTG2P63267 376 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FOXO1Q12778 655 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TNK1Q13470 666 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GALNTL5Q7Z4T8 443 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 WDFY1Q8IWB7 410 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SULF2Q8IWU5 870 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NTNG2Q96CW9 530 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NXPE2Q96DL1 559 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PELI1Q96FA3 418 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MRGPRX4Q96LA9 322 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DHRS9Q9BPW9 319 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PDCD1LG2Q9BQ51 273 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DKKL1Q9UK85 242 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ALG5Q9Y673 324 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CPAMD8Q8IZJ3 1885 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF814B7Z6K7 855 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 UQCRC1P31930 480 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 STARP49675 285 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 WIPI1Q5MNZ9 446 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LRRC75AQ8NAA5 344 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 THAP4Q8WY91 577 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CCNL2Q96S94 520 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FANCFQ9NPI8 374 aa11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MRPS7Q9Y2R9 242 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DSPP15924 2871 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TVP23AA6NH52 213 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FAM166BA8MTA8 275 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FTCDNL1E5RQL4 147 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RAMP1O60894 148 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CBR3O75828 277 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RPP14O95059 124 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 C1QBP02746 253 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MAP2K3P46734 347 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 INPP1P49441 399 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TMEM81Q6P7N7 255 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PLET1Q6UQ28 207 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PGLYRP3Q96LB9 341 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms