RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SSX8Q7RTT4 187 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 ZNF100Q8IYN0 542 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 LRRC75AQ8NAA5 344 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 EGLN3Q9H6Z9 239 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 METTL17Q9H7H0 456 aaPredicted RBP16.75■□□□□ 0.27
LIMD2-209ENST00000580222 TBC1D23Q9NUY8 699 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 PARPBPQ9NWS1 579 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 RCE1Q9Y256 329 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 POFUT2Q9Y2G5 429 aa16.75■□□□□ 0.27
LIMD2-209ENST00000580222 ARFGEF3Q5TH69 2177 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 CIB4A0PJX0 185 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 PDLIM1O00151 329 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 BCL10O95999 233 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 ZNF26P17031 533 aaPredicted RBP16.74■□□□□ 0.27
LIMD2-209ENST00000580222 DAPP51397 102 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 BIDP55957 195 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 FXYD6P3P58550 94 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 FBXW9Q5XUX1 488 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 CD300LDQ6UXZ3 194 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 THSD4Q6ZMP0 1018 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 CLDN22Q8N7P3 220 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 ZIC4Q8N9L1 334 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 LINC01356Q8N9X3 169 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 APH1AQ96BI3 265 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 TXNDC15Q96J42 360 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 SAMD8Q96LT4 415 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 MUS81Q96NY9 551 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 C9orf16Q9BUW7 83 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 EMC6Q9BV81 110 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 KATNB1Q9BVA0 655 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 SMURF2Q9HAU4 748 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 PAPOLBQ9NRJ5 636 aaKnown RBP16.74■□□□□ 0.27
LIMD2-209ENST00000580222 KRT84Q9NSB2 600 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
LIMD2-209ENST00000580222 A0A0A6YYJ9 748 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 NPIPB13A6NJU9 1138 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 ZNF726A6NNF4 738 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 NPIPB4C9JG80 1138 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 H3BN98 237 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 SLC43A1O75387 559 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 IGHMP01871 453 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 CD14P08571 375 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 SELENOPP49908 381 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 ERVK-25P63136 954 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 LGALS3BPQ08380 585 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 TRIP10Q15642 601 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 RFX4Q33E94 735 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 CARD17Q5XLA6 110 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 HDDC2Q7Z4H3 204 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 UBE2J2Q8N2K1 259 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 TEX47Q8TBZ9 253 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 ASB10Q8WXI3 467 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 EME1Q96AY2 570 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 GPX7Q96SL4 187 aaPredicted RBP16.73■□□□□ 0.27
LIMD2-209ENST00000580222 VRK1Q99986 396 aaPredicted RBP16.73■□□□□ 0.27
LIMD2-209ENST00000580222 RBM4BQ9BQ04 359 aaKnown RBP16.73■□□□□ 0.27
LIMD2-209ENST00000580222 IFT27Q9BW83 186 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 RBM4Q9BWF3 364 aaKnown RBP16.73■□□□□ 0.27
LIMD2-209ENST00000580222 TXNIPQ9H3M7 391 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 STX18Q9P2W9 335 aaKnown RBP16.73■□□□□ 0.27
LIMD2-209ENST00000580222 MOKQ9UQ07 419 aa16.73■□□□□ 0.27
LIMD2-209ENST00000580222 FAM157AC9JC47 383 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 EI24O14681 340 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 PPP1R3DO95685 299 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 ITGA5P08648 1049 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 TACSTD2P09758 323 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 OSMP13725 252 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 APEX1P27695 318 aaKnown RBP16.72■□□□□ 0.27
LIMD2-209ENST00000580222 RPS6KA3P51812 740 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 CDH15P55291 814 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 RPL27P61353 136 aaKnown RBP16.72■□□□□ 0.27
LIMD2-209ENST00000580222 CAMK2DQ13557 499 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 DAG1Q14118 895 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 SLC36A3Q495N2 470 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 CLEC12AQ5QGZ9 265 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 DPY19L2P2Q6ZN68 376 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 ZNF570Q96NI8 536 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 TSPAN32Q96QS1 320 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 OR2M2Q96R28 347 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 SNX18Q96RF0 628 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 TSSK6Q9BXA6 273 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 OSBPL10Q9BXB5 764 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 RNPEPL1Q9HAU8 725 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 IL20Q9NYY1 176 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 ZNF346Q9UL40 294 aaKnown RBP16.72■□□□□ 0.27
LIMD2-209ENST00000580222 ADAM18Q9Y3Q7 739 aa16.72■□□□□ 0.27
LIMD2-209ENST00000580222 IGFBP1P08833 259 aaPredicted RBP16.71■□□□□ 0.27
LIMD2-209ENST00000580222 POU1F1P28069 291 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 C9orf135Q5VTT2 229 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 FAM205BPQ63HN1 556 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 KDM4DQ6B0I6 523 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 NHLRC1Q6VVB1 395 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 PEG10Q86TG7 708 aaKnown RBP16.71■□□□□ 0.27
LIMD2-209ENST00000580222 CBR4Q8N4T8 237 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 OR8D4Q8NGM9 314 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 OR6X1Q8NH79 312 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 MAGEE2Q8TD90 523 aaPredicted RBP16.71■□□□□ 0.27
LIMD2-209ENST00000580222 FAM216AQ8WUB2 273 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 ERMAPQ96PL5 475 aaPredicted RBP16.71■□□□□ 0.27
LIMD2-209ENST00000580222 NRIP3Q9NQ35 241 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms