RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 GHRLQ9UBU3 117 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 TMEM200CA6NKL6 621 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 H0Y8G0 127 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 CALCBP10092 127 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 SNCAP37840 140 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 TEKQ02763 1124 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 RNF212Q495C1 297 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 CPEB2Q7Z5Q1 589 aaKnown RBP19.57■□□□□ 0.72
PTPRM-211ENST00000580170 OSGIN2Q9Y236 505 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 NXPH2O95156 264 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 F10P00742 488 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 PAQR6Q6TCH4 344 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 H1FNTQ75WM6 255 aaPredicted RBP19.57■□□□□ 0.72
PTPRM-211ENST00000580170 S100A7AQ86SG5 101 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 NRSN2Q9GZP1 204 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 HIPK2Q9H2X6 1198 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 TAS2R4Q9NYW5 299 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 ANKRD12Q6UB98 2062 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 TCRBV5S2A0A599 114 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 PRAMEF25A6NGN4 478 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 OR6C76A6NM76 312 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 TRIM77I1YAP6 450 aa19.57■□□□□ 0.72
PTPRM-211ENST00000580170 FAM155AB1AL88 458 aaPredicted RBP19.56■□□□□ 0.72
PTPRM-211ENST00000580170 ZNF587BE7ETH6 402 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 GABARAPH6UMI1 98 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 ZNF385BQ569K4 471 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 PHYHD1Q5SRE7 291 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 NUDT19A8MXV4 375 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 AKR7A3O95154 331 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 GIPP09681 153 aaPredicted RBP19.56■□□□□ 0.72
PTPRM-211ENST00000580170 ACVR1Q04771 509 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 YOD1Q5VVQ6 348 aaPredicted RBP19.56■□□□□ 0.72
PTPRM-211ENST00000580170 FOXB2Q5VYV0 432 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 GFYI3L273 518 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 TESK1Q15569 626 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 ACSM5Q6NUN0 579 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 OR2L13Q8N349 312 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 BANF2Q9H503 90 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 ZNF749O43361 778 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 RPA2P15927 270 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 RBMXL3Q8N7X1 1067 aaKnown RBP19.56■□□□□ 0.72
PTPRM-211ENST00000580170 OR5M1Q8NGP8 315 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 ZDHHC5Q9C0B5 715 aa19.56■□□□□ 0.72
PTPRM-211ENST00000580170 NFYBP25208 207 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 AFMIDQ63HM1 303 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 SEMA6DQ8NFY4 1073 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 VN1R2Q8NFZ6 395 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 OR5M8Q8NGP6 311 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 OR52I2Q8NH67 350 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 GOT1L1Q8NHS2 421 aaPredicted RBP19.55■□□□□ 0.72
PTPRM-211ENST00000580170 ASB1Q9Y576 335 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 PTAFRP25105 342 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 RAB11AP62491 216 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 ZNF239Q16600 458 aaKnown RBP19.55■□□□□ 0.72
PTPRM-211ENST00000580170 TMEM71Q6P5X7 295 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 GJC3Q8NFK1 279 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 TAF9BQ9HBM6 251 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 OR1D5P58170 312 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 GRINAQ7Z429 371 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 FAM26EQ8N5C1 309 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 FAM71CQ8NEG0 241 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 ZFPM2Q8WW38 1151 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 SLC2A1P11166 492 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 ANKRD34AQ69YU3 496 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 FAM185AQ8N0U4 392 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 A0A1W2PR48 441 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 FITM1A5D6W6 292 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 SULT1C4O75897 302 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 CDCA4Q9BXL8 241 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 DUSP22Q9NRW4 184 aa19.55■□□□□ 0.72
PTPRM-211ENST00000580170 MYO18AQ92614 2054 aaKnown RBP19.54■□□□□ 0.72
PTPRM-211ENST00000580170 ACHEP22303 614 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 TGFBR1P36897 503 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 TOR2AQ5JU69 321 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 LFNGQ8NES3 379 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 SDF2Q99470 211 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 TMEM43Q9BTV4 400 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 LTB4R2Q9NPC1 389 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 LRP5LA4QPB2 252 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 ZAR1LA6NP61 321 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 LGI3Q8N145 548 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 PRSS35Q8N3Z0 413 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 C15orf54Q8N8G6 183 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 OR1M1Q8NGA1 313 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 HS3ST3A1Q9Y663 406 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 EIF4E2O60573 245 aaKnown RBP19.54■□□□□ 0.72
PTPRM-211ENST00000580170 OLFM2O95897 454 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 HMGA1P17096 107 aaKnown RBP19.54■□□□□ 0.72
PTPRM-211ENST00000580170 DGCR2P98153 550 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 SLC10A1Q14973 349 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 LIPHQ8WWY8 451 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 DUS3LQ96G46 650 aaKnown RBP19.54■□□□□ 0.72
PTPRM-211ENST00000580170 SLC25A32Q9H2D1 315 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 ALOX12BO75342 701 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 P2RX1P51575 399 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 ZNF92Q03936 586 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 OTUD1Q5VV17 481 aaPredicted RBP19.54■□□□□ 0.72
PTPRM-211ENST00000580170 TAS2R5Q9NYW4 299 aa19.54■□□□□ 0.72
PTPRM-211ENST00000580170 C19orf53Q9UNZ5 99 aaPredicted RBP19.54■□□□□ 0.72
PTPRM-211ENST00000580170 SLC6A12P48065 614 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms