RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 TRIM36Q9NQ86 728 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 SSR3Q9UNL2 185 aa9.03□□□□□ -0.96
SS18-207ENST00000577636 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
SS18-207ENST00000577636 A0A1W2PPW3 197 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 OR6C68A6NDL8 312 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 EEF1E1-BLOC1S5C9J1V9 151 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 ZNF670-ZNF695F2Z2N8 137 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 EEF1E1O43324 174 aaKnown RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 AHCYL1O43865 530 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 TRAPPC6AO75865 159 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 IL2RAP01589 272 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 HEXAP06865 529 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 NR4A1P22736 598 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 GADD45AP24522 165 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 GDF1P27539 372 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 CRABP1P29762 137 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SFTPDP35247 375 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SOX6P35712 828 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 TGFBR2P37173 567 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 CDKN2AP42771 156 aaKnown RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 LSM3P62310 102 aaKnown RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 RAC1P63000 192 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 POU3F1Q03052 451 aaPredicted RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 GALEQ14376 348 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 GGTLC2Q14390 218 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 DAZAP2Q15038 168 aaPredicted RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 CTF1Q16619 201 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 MESTQ5EB52 335 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SLC16A12Q6ZSM3 486 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 PXKQ7Z7A4 578 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 UEVLDQ8IX04 471 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 NAXEQ8NCW5 288 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 HAVCR2Q8TDQ0 301 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SNX33Q8WV41 574 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 ZMYND19Q96E35 227 aaPredicted RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 ARL5BQ96KC2 179 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 OPALINQ96PE5 141 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 TBX5Q99593 518 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 CHCHD6Q9BRQ6 235 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 ALG12Q9BV10 488 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 NMNAT2Q9BZQ4 307 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 ADGRL4Q9HBW9 690 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 SRA1Q9HD15 236 aaKnown RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 EXOSC4Q9NPD3 245 aaKnown RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 TIGARQ9NQ88 270 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 ASB6Q9NWX5 421 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 NDUFB11Q9NX14 153 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 BABAM2Q9NXR7 383 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 STUB1Q9UNE7 303 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 MRPS18CQ9Y3D5 142 aaKnown RBP9.02□□□□□ -0.97
SS18-207ENST00000577636 TMEM14AQ9Y6G1 99 aa9.02□□□□□ -0.97
SS18-207ENST00000577636 A0A1W2PNV4 684 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 OR2M5A3KFT3 312 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 PRSS37A4D1T9 235 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 TRIM64BA6NI03 449 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 FAM171A2A8MVW0 826 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 PHYHO14832 338 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 DNPH1O43598 174 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 AKR7A3O95154 331 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 VAMP5O95183 116 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 PMS2P2O95744 297 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 HLA-DQA2P01906 255 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 TACSTD2P09758 323 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 CLUP10909 449 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 IMPDH2P12268 514 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 CPEP16870 476 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 GBX2P52951 348 aaPredicted RBP9.01□□□□□ -0.97
SS18-207ENST00000577636 VBP1P61758 197 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 ACSM1Q08AH1 577 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 DYNC1I2Q13409 638 aaKnown RBP9.01□□□□□ -0.97
SS18-207ENST00000577636 LSAMPQ13449 338 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 GPR50Q13585 617 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 TPBGQ13641 420 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 TRAM1Q15629 374 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 LIPKQ5VXJ0 399 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 SHEQ5VZ18 495 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 PAQR6Q6TCH4 344 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
SS18-207ENST00000577636 B3GLCTQ6Y288 498 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 TMPPEQ6ZT21 453 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 SLC35D2Q76EJ3 337 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 SLC16A9Q7RTY1 509 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 FAM220AQ7Z4H9 259 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 EGFL6Q8IUX8 553 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 SYS1Q8N2H4 156 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 CIARTQ8N365 385 aaPredicted RBP9.01□□□□□ -0.97
SS18-207ENST00000577636 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 OR51L1Q8NGJ5 315 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 OR5M1Q8NGP8 315 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 SPRYD4Q8WW59 207 aaPredicted RBP9.01□□□□□ -0.97
SS18-207ENST00000577636 KISS1RQ969F8 398 aaPredicted RBP9.01□□□□□ -0.97
SS18-207ENST00000577636 SFXN2Q96NB2 322 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 RBP7Q96R05 134 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 COQ7Q99807 217 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms