RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GLYATL2Q8WU03 294 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 C14orf79Q96F83 325 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 ARHGDIGQ99819 225 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC7A11Q9UPY5 501 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 MRPS28Q9Y2Q9 187 aaKnown RBP16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 LOC107986453A0A1B0GWG9 222 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 HSPB6O14558 160 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 PLPP2O43688 288 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 VWA2Q5GFL6 755 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 EXOSC6Q5RKV6 272 aaKnown RBP16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 FAM219AQ8IW50 185 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 KCNRGQ8N5I3 272 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 DCBLD2Q96PD2 775 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 SDHCQ99643 169 aaPredicted RBP16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 MEIKINA0A087WXM9 373 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 SERPINF1P36955 418 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 CRYBA2P53672 197 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 NR0B2Q15466 257 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 MLF2Q15773 248 aaPredicted RBP16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 MUC20Q8N307 709 aaPredicted RBP16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 RNF141Q8WVD5 230 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 PIGTQ969N2 578 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 TOX2Q96NM4 488 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 NIT2Q9NQR4 276 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 CA14Q9ULX7 337 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 LY75O60449 1722 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 C9J4A7 227 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 SRYQ05066 204 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 CAMK2BQ13554 666 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 GLIPR1L1Q6UWM5 242 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 FAM122BQ7Z309 247 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 UBE3DQ7Z6J8 389 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 IL17RCQ8NAC3 791 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 CCDC54Q8NEL0 328 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 OR1J2Q8NGS2 313 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 TCTEX1D2Q8WW35 142 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 PHYHIPQ92561 330 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 MIB2Q96AX9 1013 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 PBDC1Q9BVG4 233 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 ADGRL4Q9HBW9 690 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 CUTCQ9NTM9 273 aa16.29■□□□□ 0.2
ATPAF1-214ENST00000576409 DUX1O43812 170 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 IL33O95760 270 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 ALOX5APP20292 161 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF84P51523 738 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 CPEB2Q7Z5Q1 589 aaKnown RBP16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 FAM213BQ8TBF2 198 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 FBLIM1Q8WUP2 373 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 CMBLQ96DG6 245 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 SIGLEC11Q96RL6 698 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 OR5V1Q9UGF6 321 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 PRAMEF26H0Y7S4 382 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 AKR7A3O95154 331 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 TAS2R31P59538 309 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 BCORP1Q8N888 145 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 OR10Z1Q8NGY1 313 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 MARCH1Q8TCQ1 289 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 TSLPQ969D9 159 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 DDIT4LQ96D03 193 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 BORCS8Q96FH0 119 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 STACQ99469 402 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 OLFM2O95897 454 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 HLXQ14774 488 aaPredicted RBP16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 ZAR1Q86SH2 424 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 ADGRE4PQ86SQ3 457 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 FJX1Q86VR8 437 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 ASB17Q8WXJ9 295 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 LINC00615Q96LM1 132 aaPredicted RBP16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF304Q9HCX3 659 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 DZANK1Q9NVP4 752 aa16.28■□□□□ 0.2
ATPAF1-214ENST00000576409 GALR3O60755 368 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 OR7C1O76099 320 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 TBXA2RP21731 343 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 TSFMP43897 325 aaKnown RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 DAP3P51398 398 aaKnown RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 OR2B8PP59922 312 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 TSEN54Q7Z6J9 526 aaKnown RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 TMEM200AQ86VY9 491 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF611Q8N823 705 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 ANGPTL6Q8NI99 470 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 LCORQ96JN0 433 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 NXF2Q9GZY0 626 aaKnown RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 C1orf198Q9H425 327 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 NTMQ9P121 344 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF629Q9UEG4 869 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 FCGR2AP12318 317 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 NR2C1P13056 603 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 GNB3P16520 340 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 PLA2G7Q13093 441 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 PHLDA2Q53GA4 152 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 GLDNQ6ZMI3 551 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 FBXW5Q969U6 566 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 CLCC1Q96S66 551 aa16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-214ENST00000576409 ROS1P08922 2347 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 DIRAS3O95661 229 aa16.27■□□□□ 0.19
ATPAF1-214ENST00000576409 LPLP06858 475 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms