RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 UMAD1C9J7I0 102 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 EXOSC6Q5RKV6 272 aaKnown RBP11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR2G2Q8NGZ5 317 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 OCSTAMPQ9BR26 566 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 CDC14CA4D256 554 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 PTAFRP25105 342 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 IGSF11Q5DX21 431 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF425Q6IV72 752 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OPN5Q6U736 354 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR4D11Q8NGI4 311 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 CMSS1Q9BQ75 279 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 FBXO4Q9UKT5 387 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 FBXO7Q9Y3I1 522 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 PCM1Q15154 2024 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 CPED1A4D0V7 1026 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF98A6NK75 572 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 NME2P1O60361 137 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 PRAMEF4O60810 478 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 HBE1P02100 147 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 SERPINE2P07093 398 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 MPPED2Q15777 294 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 TMEM52BQ4KMG9 183 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 PRAMEF9Q5VWM5 478 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 WDR88Q6ZMY6 472 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 VN1R2Q8NFZ6 395 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR5D18Q8NGL1 313 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 SDHCQ99643 169 aaPredicted RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR10A5Q9H207 317 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 APOBEC3BQ9UH17 382 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 TRAV36DV7A0A075B6V5 113 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 HNRNPA2B1P22626 353 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 SDHAP31040 664 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 CLINT1Q14677 625 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 LFNGQ8NES3 379 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR4D9Q8NGE8 314 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR5M9Q8NGP3 310 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 NUDCD2Q8WVJ2 157 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 RBM24Q9BX46 236 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR5V1Q9UGF6 321 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 ASCC3Q8N3C0 2202 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 NUDT21O43809 227 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF354AO60765 605 aaPredicted RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 AVPR2P30518 371 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 F2RL1P55085 397 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 PCBP4P57723 403 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 RPL23AP62750 156 aaKnown RBP11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 SKA3Q8IX90 412 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF595Q8IYB9 648 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 HGDQ93099 445 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC2A4RGQ9NR83 387 aa11.98□□□□□ -0.49
PCDHGB3-201ENST00000576222 ANKRD20A5PA0PJZ0 165 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 TP53I11O14683 189 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 GSTZ1O43708 216 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 CNOT4O95628 575 aaKnown RBP11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 RPS2P15880 293 aaKnown RBP11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 MELKQ14680 651 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 GLIPR1L1Q6UWM5 242 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 TMPRSS11FQ6ZWK6 438 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 MED25Q71SY5 747 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR2L13Q8N349 312 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 TINAGL1Q9GZM7 467 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 NXF5Q9H1B4 397 aaKnown RBP11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 DKKL1Q9UK85 242 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR51B4Q9Y5P0 310 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 A0A0A6YYD5 115 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 MSTNO14793 375 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 NQO2P16083 231 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 AKR1C3P42330 323 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 DPTQ07507 201 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 PDZD11Q5EBL8 140 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 MORN4Q8NDC4 146 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR1S2Q8NGQ3 325 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR51Q1Q8NH59 317 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 SPTSSAQ969W0 71 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 MARVELD3Q96A59 401 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 C20orf141Q9NUB4 165 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC23A2Q9UGH3 650 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC22A13Q9Y226 551 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 B3GALT5Q9Y2C3 310 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 GPR31O00270 319 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 IGHA1P01876 353 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 LCATP04180 440 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 ITGB8P26012 769 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 THBS2P35442 1172 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 Q6ZNB5 142 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 FAM57BQ71RH2 274 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 TMEM229BQ8NBD8 167 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR14A16Q8NHC5 309 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 DEFB126Q9BYW3 111 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR10A2Q9H208 303 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 ADGRL4Q9HBW9 690 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 KLHL13Q9P2N7 655 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 C19orf25Q9UFG5 118 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 PLEKHM1Q9Y4G2 1056 aa11.97□□□□□ -0.49
PCDHGB3-201ENST00000576222 LOC107986453A0A1B0GWG9 222 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 RNASEK-C17orf49H0YIS7 233 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 CTDSPLO15194 276 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms