RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MS4A3Q96HJ5 214 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 DACH2Q96NX9 599 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 TSSK2Q96PF2 358 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 KCNK17Q96T54 332 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 SH3GL3Q99963 347 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 RHNO1Q9BSD3 238 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 OR52D1Q9H346 318 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 TXNIPQ9H3M7 391 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CXorf56Q9H5V9 222 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 SLC17A5Q9NRA2 495 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CNOT2Q9NZN8 540 aaKnown RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 KCNN3Q9UGI6 736 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 UGT2A1Q9Y4X1 527 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 SLC25A15Q9Y619 301 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 SPG11Q96JI7 2443 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 MAP1AP78559 2803 aaPredicted RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 A0A1W2PRG6 482 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 DPRXA6NFQ7 191 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF726A6NNF4 738 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 FAM171A2A8MVW0 826 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 H3BSA7 217 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 M0R1B8 84 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 DCTN6O00399 190 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 ARHGEF9O43307 516 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 NDUFB2O95178 105 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 BCL10O95999 233 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 HLA-HP01893 362 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 CDK1P06493 297 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 QDPRP09417 244 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 CTLA4P16410 223 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 GIPRP48546 466 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 PCYT1AP49585 367 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 DAP3P51398 398 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 GP2P55259 537 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 RPL27P61353 136 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 EMX1Q04741 257 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 PIGFQ07326 219 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 KRR1Q13601 381 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 P2RY6Q15077 328 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 PPA1Q15181 289 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 TBCEQ15813 527 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 HIST3H3Q16695 136 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 SLC35F1Q5T1Q4 408 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 SYT6Q5T7P8 510 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 RNLSQ5VYX0 342 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM236Q5W0B7 351 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 SMARCD3Q6STE5 483 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 RRM2BQ7LG56 351 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 GPR141Q7Z602 305 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 MDP1Q86V88 176 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 CDC20BQ86Y33 519 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 POMGNT2Q8NAT1 580 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 OR8J1Q8NGP2 316 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 LILRB1Q8NHL6 650 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 FAM222BQ8WU58 562 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 GGHQ92820 318 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 BCL2L2Q92843 193 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 MCHR2Q969V1 340 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 NABP1Q96AH0 204 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 LURAP1Q96LR2 239 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 MRPL13Q9BYD1 178 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 LINC00470Q9BZP3 86 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 RASSF1Q9NS23 344 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 MRPS18AQ9NVS2 196 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 PARPBPQ9NWS1 579 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 SCN3BQ9NY72 215 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 GLTPQ9NZD2 209 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 PTTG2Q9NZH5 202 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 ERVK-18Q9QC07 812 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM5Q9Y2B1 443 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 GPR52Q9Y2T5 361 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 IER3IP1Q9Y5U9 82 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 CDH10Q9Y6N8 788 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 COMMD3-BMI1R4GMX3 469 aa6.9□□□□□ -1.3
CCDC40-215ENST00000576033 CCDC168Q8NDH2 2452 aa6.9□□□□□ -1.31
CCDC40-215ENST00000576033 PLCE1Q9P212 2302 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 IGHV1-18A0A0C4DH31 117 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 A0A1W2PPL8 197 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 FAM221AA4D161 298 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 HTR3EA5X5Y0 456 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 EFCAB10A6NFE3 127 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF99A8MXY4 864 aaPredicted RBP6.89□□□□□ -1.31
CCDC40-215ENST00000576033 BHLHE40O14503 412 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 RGS10O43665 173 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 FAM20BO75063 409 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 MPZL1O95297 269 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 IGHG1P01857 330 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 MT-ND2P03891 347 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 CD14P08571 375 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 ADRA2AP08913 450 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 CLUP10909 449 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 HIST1H1CP16403 213 aaKnown RBP6.89□□□□□ -1.31
CCDC40-215ENST00000576033 EEF1B2P24534 225 aaKnown RBP6.89□□□□□ -1.31
CCDC40-215ENST00000576033 CALCRP30988 508 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 CDKN2AP42771 156 aaKnown RBP6.89□□□□□ -1.31
CCDC40-215ENST00000576033 CAPZA2P47755 286 aa6.89□□□□□ -1.31
CCDC40-215ENST00000576033 GINS1Q14691 196 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms