RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CBR1P16152 277 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 ARR3P36575 388 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF83P51522 516 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 NR1H2P55055 460 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 RAB1AP62820 205 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 HSF2Q03933 536 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 PIGFQ07326 219 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 DBPQ10586 325 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-217ENST00000575711 FBXW10Q5XX13 1052 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 TMEM53Q6P2H8 277 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 SEZ6L2Q6UXD5 910 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 CXXC5Q7LFL8 322 aaKnown RBP12.2□□□□□ -0.46
RPAIN-217ENST00000575711 MDP1Q86V88 176 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 CPOQ8IVL8 374 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 FAM169BQ8N8A8 192 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 TCEANCQ8N8B7 351 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 OR10H5Q8NGA6 315 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 OR51L1Q8NGJ5 315 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 C11orf40Q8WZ69 217 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 PTP4A1Q93096 173 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 HRASLS5Q96KN8 279 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 WACQ9BTA9 647 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 OR51V1Q9H2C8 321 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 ESRP2Q9H6T0 727 aaKnown RBP12.2□□□□□ -0.46
RPAIN-217ENST00000575711 MED20Q9H944 212 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 CCNB1IP1Q9NPC3 277 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF224Q9NZL3 707 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 POLR1DQ9Y2S0 133 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.19□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF503-AS2A6NEH8 195 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 C12orf71A8MTZ7 269 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 TLX2O43763 284 aaPredicted RBP12.19□□□□□ -0.46
RPAIN-217ENST00000575711 MPZL1O95297 269 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 GPANK1O95872 356 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 IGKV3-15P01624 115 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 SCG5P05408 212 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 PATE4P0C8F1 98 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF823P16415 610 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 PTAFRP25105 342 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 FMO3P31513 532 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 GGT2P36268 569 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 BLVRAP53004 296 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 PCBD1P61457 104 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
RPAIN-217ENST00000575711 TEKQ02763 1124 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 KCNMB1Q16558 191 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 C3orf36Q3SXR2 165 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 KLHL12Q53G59 568 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF787Q6DD87 383 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 UGT2A3Q6UWM9 527 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 TMEM108Q6UXF1 575 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.19□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF555Q8NEP9 628 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 SLC26A10Q8NG04 563 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 OR6K6Q8NGW6 343 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 FAM81AQ8TBF8 368 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 TMEM163Q8TC26 289 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 C14orf79Q96F83 325 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 PIK3IP1Q96FE7 263 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 PLPPR2Q96GM1 343 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF416Q9BWM5 594 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 NOX3Q9HBY0 568 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 IMPAD1Q9NX62 359 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 B3GNT2Q9NY97 397 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 CRNNQ9UBG3 495 aaPredicted RBP12.19□□□□□ -0.46
RPAIN-217ENST00000575711 FBXL3Q9UKT7 428 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 GMPPBQ9Y5P6 360 aa12.19□□□□□ -0.46
RPAIN-217ENST00000575711 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-217ENST00000575711 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 DEFB108AA8MXU0 73 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 M0R129 80 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 PRODHO43272 600 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 GLCEO94923 617 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 HRGP04196 525 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 ZNF32P17041 273 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 SSTR2P30874 369 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-217ENST00000575711 RPS7P62081 194 aaKnown RBP12.18□□□□□ -0.46
RPAIN-217ENST00000575711 SCRN3Q0VDG4 424 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 AQP6Q13520 282 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 ENDOGQ14249 297 aaKnown RBP12.18□□□□□ -0.46
RPAIN-217ENST00000575711 MEP1BQ16820 701 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 SLC35D3Q5M8T2 416 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 NCMAPQ5T1S8 102 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 SYT9Q86SS6 491 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 OR8J1Q8NGP2 316 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 FGFBP3Q8TAT2 258 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 ZNRF4Q8WWF5 429 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 TRUB1Q8WWH5 349 aaKnown RBP12.18□□□□□ -0.46
RPAIN-217ENST00000575711 FBXO17Q96EF6 278 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 IL4I1Q96RQ9 567 aa12.18□□□□□ -0.46
RPAIN-217ENST00000575711 PITX2Q99697 317 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms