RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PLCE1Q9P212 2302 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 C12orf71A8MTZ7 269 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 ATE1O95260 518 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 IFNGP01579 166 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 SERPINA5P05154 406 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 IGFBP1P08833 259 aaPredicted RBP13.21□□□□□ -0.29
LITAF-217ENST00000575426 CST2P09228 141 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 OSMP13725 252 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 CTLA4P16410 223 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 ZNF14P17017 642 aaPredicted RBP13.21□□□□□ -0.29
LITAF-217ENST00000575426 CD53P19397 219 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 FABP6P51161 128 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 GABPB1Q06547 395 aaPredicted RBP13.21□□□□□ -0.29
LITAF-217ENST00000575426 SLC36A3Q495N2 470 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 FOXL2NBQ6ZUU3 175 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 SVOPLQ8N434 492 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 OR8D4Q8NGM9 314 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 OR1J2Q8NGS2 313 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 FGFBP3Q8TAT2 258 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 NABP1Q96AH0 204 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 CENPNQ96H22 339 aaPredicted RBP13.21□□□□□ -0.29
LITAF-217ENST00000575426 DHRS9Q9BPW9 319 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 C1orf198Q9H425 327 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.29
LITAF-217ENST00000575426 POLE4Q9NR33 117 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 LAMP3Q9UQV4 416 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 TEX15Q9BXT5 2789 aa13.21□□□□□ -0.29
LITAF-217ENST00000575426 IGHV2OR16-5A0A0B4J2B6 119 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 RIIAD1A6NNX1 92 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 E7EQL1 145 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 TMCC2O75069 709 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 APLNRP35414 380 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 GALK2Q01415 458 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 AGAP6Q5VW22 663 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 SLC27A4Q6P1M0 643 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 SYT9Q86SS6 491 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 OR10H5Q8NGA6 315 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 MBD6Q96DN6 1003 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 FOXN4Q96NZ1 517 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 TSSK2Q96PF2 358 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 SEMA6AQ9H2E6 1030 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 CDH20Q9HBT6 801 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 NOX3Q9HBY0 568 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
LITAF-217ENST00000575426 BEX4Q9NWD9 120 aaPredicted RBP13.2□□□□□ -0.3
LITAF-217ENST00000575426 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 B9D1Q9UPM9 204 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 TIMM10BQ9Y5J6 103 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 FKBP7Q9Y680 259 aa13.2□□□□□ -0.3
LITAF-217ENST00000575426 OR6C68A6NDL8 312 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 SMPD2O60906 423 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 HLA-DQA2P01906 255 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 TP53P04637 393 aaPredicted RBP13.19□□□□□ -0.3
LITAF-217ENST00000575426 HMGN1P05114 100 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
LITAF-217ENST00000575426 ZNF32P17041 273 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 CALCRP30988 508 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 APOBEC3AP31941 199 aaPredicted RBP13.19□□□□□ -0.3
LITAF-217ENST00000575426 GRK5P34947 590 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 ART1P52961 327 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
LITAF-217ENST00000575426 GLO1Q04760 184 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 DAG1Q14118 895 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 GINS1Q14691 196 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 ZSCAN26Q16670 478 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 TBC1D28Q2M2D7 210 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 DEFB113Q30KQ7 82 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 PGGHGQ32M88 737 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 MYPOPQ86VE0 399 aaPredicted RBP13.19□□□□□ -0.3
LITAF-217ENST00000575426 OR6V1Q8N148 313 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 NPEPL1Q8NDH3 523 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 OR2T4Q8NH00 348 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 ZNF75AQ96N20 296 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 ZNF416Q9BWM5 594 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 FN3KQ9H479 309 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 EMC7Q9NPA0 242 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 POLR1DQ9Y2S0 133 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 CREBBPQ92793 2442 aa13.19□□□□□ -0.3
LITAF-217ENST00000575426 ZNF3P17036 446 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 TTKP33981 857 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 DAPP51397 102 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 SCRN3Q0VDG4 424 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 ZBTB46Q86UZ6 589 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 MUC15Q8N387 334 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 SLC37A3Q8NCC5 494 aa13.18□□□□□ -0.3
LITAF-217ENST00000575426 NUP37Q8NFH4 326 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms