RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 PRR23D1E9PI22 279 aaPredicted RBP12.58□□□□□ -0.4
ABR-223ENST00000573895 ARHGEF9O43307 516 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 TRAF3IP2O43734 574 aaPredicted RBP12.58□□□□□ -0.4
ABR-223ENST00000573895 PRKYO43930 277 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 SMPD2O60906 423 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 ZNF432O94892 652 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 PLAUP00749 431 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 RENP00797 406 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 PRR23D2P0DMB1 279 aaPredicted RBP12.58□□□□□ -0.4
ABR-223ENST00000573895 HLA-DOBP13765 273 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 HIST1H1CP16403 213 aaKnown RBP12.58□□□□□ -0.4
ABR-223ENST00000573895 GABRB1P18505 474 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 ACVR1BP36896 505 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 BSPH1Q075Z2 132 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
ABR-223ENST00000573895 CD47Q08722 323 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 KRR1Q13601 381 aaKnown RBP12.58□□□□□ -0.4
ABR-223ENST00000573895 PRSS57Q6UWY2 283 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 JAZF1Q86VZ6 243 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 NPEPL1Q8NDH3 523 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 OR4K13Q8NH42 304 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 ASB10Q8WXI3 467 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 AKAP1Q92667 903 aaKnown RBP eCLIP12.58□□□□□ -0.4
ABR-223ENST00000573895 RFKQ969G6 155 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 TSPAN32Q96QS1 320 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
ABR-223ENST00000573895 IL4I1Q96RQ9 567 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 DDOQ99489 341 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 OBP2BQ9NPH6 170 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 AMDHD2Q9Y303 409 aa12.58□□□□□ -0.4
ABR-223ENST00000573895 TEX13CA0A0J9YWL9 993 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 RPL36A-HNRNPH2H7BZ11 118 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 NR2C1P13056 603 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 CD99P14209 185 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 FOSL1P15407 271 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 PTAFRP25105 342 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 CDKN2AP42771 156 aaKnown RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 SELENOPP49908 381 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 SLC25A1P53007 311 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 FOXG1P55316 489 aaPredicted RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 NKX6-1P78426 367 aaPredicted RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 TMED1Q13445 227 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 ZNF672Q499Z4 452 aaPredicted RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 RBM48Q5RL73 367 aaKnown RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 C6orf141Q5SZD1 244 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 NXNL2Q5VZ03 156 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 ALKBH2Q6NS38 261 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 TMEM108Q6UXF1 575 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 CPOQ8IVL8 374 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 SLC37A3Q8NCC5 494 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 HDAC2Q92769 488 aaKnown RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 FBXW5Q969U6 566 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 RASD2Q96D21 266 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 SLC25A44Q96H78 314 aaPredicted RBP12.57□□□□□ -0.4
ABR-223ENST00000573895 TXNDC15Q96J42 360 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 ALG12Q9BV10 488 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 GSX2Q9BZM3 304 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 PLCXD1Q9NUJ7 323 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 UBAP1Q9NZ09 502 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 NPAP1Q9NZP6 1156 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 C2CD3Q4AC94 2353 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 NF1P21359 2839 aa12.57□□□□□ -0.4
ABR-223ENST00000573895 ZFHX3Q15911 3703 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 SLC35F4A4IF30 521 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 SERPINI2O75830 405 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 KRT33AO76009 404 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 SLC2A10O95528 541 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 WNT11O96014 354 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 CCDC159P0C7I6 412 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
ABR-223ENST00000573895 CENPAP49450 140 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
ABR-223ENST00000573895 BIDP55957 195 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 CLDN17P56750 224 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 LGALS3BPQ08380 585 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 CRMP1Q14194 572 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 NIPAL3Q6P499 406 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 CXXC5Q7LFL8 322 aaKnown RBP12.56□□□□□ -0.4
ABR-223ENST00000573895 KRTAP1-3Q8IUG1 177 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 GID4Q8IVV7 300 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 WDR31Q8NA23 367 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 OR52N5Q8NH56 324 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 LRR1Q96L50 414 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 RBP7Q96R05 134 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 NMNAT3Q96T66 252 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 MRPL13Q9BYD1 178 aaKnown RBP12.56□□□□□ -0.4
ABR-223ENST00000573895 CXorf56Q9H5V9 222 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 MOV10Q9HCE1 1003 aaKnown RBP12.56□□□□□ -0.4
ABR-223ENST00000573895 ZNF701Q9NV72 531 aaPredicted RBP12.56□□□□□ -0.4
ABR-223ENST00000573895 SCN3BQ9NY72 215 aa12.56□□□□□ -0.4
ABR-223ENST00000573895 VSX1Q9NZR4 365 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms