RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ASB17Q8WXJ9 295 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 SLC25A36Q96CQ1 311 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 MAP3K3Q99759 626 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 SLC25A21Q9BQT8 299 aaPredicted RBP14.1□□□□□ -0.15
NUP88-207ENST00000573584 RTN4RQ9BZR6 473 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 TINAGL1Q9GZM7 467 aaPredicted RBP14.1□□□□□ -0.15
NUP88-207ENST00000573584 PNO1Q9NRX1 252 aaKnown RBP14.1□□□□□ -0.15
NUP88-207ENST00000573584 CACNA1IQ9P0X4 2223 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 TRAV14DV4A0A0A6YYC5 116 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 B4DGG1 531 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 HCRTR2O43614 444 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 AMY2AP04746 511 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 MELTFP08582 738 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 HTR2CP28335 458 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 PBX2P40425 430 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 PPICP45877 212 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 SLC37A1P57057 533 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 BIKQ13323 160 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 BEST3Q8N1M1 668 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 GALNT16Q8N428 558 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 FAM160A2Q8N612 972 aaPredicted RBP14.1□□□□□ -0.15
NUP88-207ENST00000573584 TMEM229BQ8NBD8 167 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 SULT1C2O00338 296 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 SLC16A7O60669 478 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 SERTAD2Q14140 314 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 TOMM20Q15388 145 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 TOMM34Q15785 309 aaPredicted RBP14.09□□□□□ -0.15
NUP88-207ENST00000573584 STEAP2Q8NFT2 490 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 PTPMT1Q8WUK0 201 aaPredicted RBP14.09□□□□□ -0.15
NUP88-207ENST00000573584 ASB5Q8WWX0 329 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 SLC25A28Q96A46 364 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 OR8D2Q9GZM6 311 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 SLC25A32Q9H2D1 315 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 ZMAT3Q9HA38 289 aaKnown RBP14.09□□□□□ -0.15
NUP88-207ENST00000573584 PRSS37A4D1T9 235 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 TOR1AO14656 332 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 SEMA4FO95754 770 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 APOC3P02656 99 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 BGLAPP02818 100 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 CD2P06729 351 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 MGMTP16455 207 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 ACHEP22303 614 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 ZNF117Q03924 483 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 MFGE8Q08431 387 aaPredicted RBP14.09□□□□□ -0.15
NUP88-207ENST00000573584 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 PXT1Q8NFP0 134 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 TCTN2Q96GX1 697 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 PBX4Q9BYU1 374 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 LAT2Q9GZY6 243 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 TAS2R4Q9NYW5 299 aa14.09□□□□□ -0.15
NUP88-207ENST00000573584 CGGBP1Q9UFW8 167 aaPredicted RBP14.09□□□□□ -0.15
NUP88-207ENST00000573584 TTLL8A6PVC2 850 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 C17orf51A8MQB3 221 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 NUDT14O95848 222 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 CYB5AP00167 134 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 ETFDHQ16134 617 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 ACKR1Q16570 336 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 ST8SIA2Q92186 375 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 MRPS24Q96EL2 167 aaKnown RBP14.08□□□□□ -0.15
NUP88-207ENST00000573584 SLC41A2Q96JW4 573 aa14.08□□□□□ -0.15
NUP88-207ENST00000573584 PELOQ9BRX2 385 aaKnown RBP14.08□□□□□ -0.15
NUP88-207ENST00000573584 MRPL22Q9NWU5 206 aaKnown RBP14.08□□□□□ -0.15
NUP88-207ENST00000573584 MYEF2Q9P2K5 600 aaKnown RBP14.08□□□□□ -0.15
NUP88-207ENST00000573584 FARSAQ9Y285 508 aaKnown RBP14.08□□□□□ -0.15
NUP88-207ENST00000573584 TRAV36DV7A0A075B6V5 113 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 A0A1W2PPC1 479 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 TCRBV21S2A2A0A5A6 115 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 DCDC2BA2VCK2 349 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 OR5H14A6NHG9 310 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 PRAMEF26H0Y7S4 382 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 SMAD9O15198 467 aaKnown RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 ICOSLGO75144 302 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 AGTR1P30556 359 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 SLC6A8P48029 635 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 ADAM8P78325 824 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 NR0B2Q15466 257 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 KCTD18Q6PI47 426 aaPredicted RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 MDGA2Q7Z553 956 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 OR52H1Q8NGJ2 320 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 OR1J2Q8NGS2 313 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 OIT3Q8WWZ8 545 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 MRPS18BQ9Y676 258 aaKnown RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 SPTY2D1-AS1A0A0U1RR47 76 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 ALOX12BO75342 701 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 FNTBP49356 437 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 RPL27P61353 136 aaKnown RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 INSM1Q01101 510 aaPredicted RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 ROM1Q03395 351 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 SCGB2B2Q4G0G5 96 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 ATPAF1Q5TC12 328 aaPredicted RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 MAMDC2Q7Z304 686 aaPredicted RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 OR10K1Q8NGX5 313 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 RELTQ969Z4 430 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 SLC25A44Q96H78 314 aaPredicted RBP14.08□□□□□ -0.16
NUP88-207ENST00000573584 SLC46A1Q96NT5 459 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 GAL3ST4Q96RP7 486 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 SLC38A3Q99624 504 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 S1PR5Q9H228 398 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms