RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 FIGNL2A6NMB9 653 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 ABOP16442 354 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 MSR1P21757 451 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 LIPAP38571 399 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 OR12D2P58182 307 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
CCDC40-209ENST00000573474 BDH1Q02338 343 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 EGR3Q06889 387 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 SGCAQ16586 387 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 ZNF684Q5T5D7 378 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 TSPO2Q5TGU0 170 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 GPR107Q5VW38 600 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 RPTNQ6XPR3 784 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 PLEKHG7Q6ZR37 379 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 CLVS1Q8IUQ0 354 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-209ENST00000573474 RFLNBQ8N5W9 214 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 C9orf106Q8NAJ2 232 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 DGCR14Q96DF8 476 aaKnown RBP12.08□□□□□ -0.48
CCDC40-209ENST00000573474 C4orf36Q96KX1 117 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 TTYH2Q9BSA4 534 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
CCDC40-209ENST00000573474 ISG20L2Q9H9L3 353 aaKnown RBP12.08□□□□□ -0.48
CCDC40-209ENST00000573474 CRLF2Q9HC73 371 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 ASF1BQ9NVP2 202 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 KLHDC2Q9Y2U9 406 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 EMC9Q9Y3B6 208 aa12.08□□□□□ -0.48
CCDC40-209ENST00000573474 METTL15A6NJ78 407 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 RPL36A-HNRNPH2H7BZ11 118 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 ERVH48-1M5A8F1 160 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 SULT1C4O75897 302 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 TACSTD2P09758 323 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 PSKH1P11801 424 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 CD36P16671 472 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 CPEP16870 476 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 NPR2P20594 1047 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 RPS27P42677 84 aaKnown RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 RGS6P49758 472 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 MRPS34P82930 218 aaKnown RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 ROR2Q01974 943 aaKnown RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 TPBGQ13641 420 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 DOC2BQ14184 412 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 EIF2B1Q14232 305 aaKnown RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 GUSBP1Q15486 140 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 TSTQ16762 297 aaKnown RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 TP53I3Q53FA7 332 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 C1orf185Q5T7R7 199 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 FOXB2Q5VYV0 432 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 OTPQ5XKR4 325 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 KCTD18Q6PI47 426 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 GFRALQ6UXV0 394 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 FAM214BQ7L5A3 538 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 VASH1Q7L8A9 365 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 LINGO2Q7L985 606 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 CD163Q86VB7 1156 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 KLBQ86Z14 1044 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 OR2AJ1Q8NGZ0 328 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-209ENST00000573474 FUNDC2Q9BWH2 189 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 TTTY10Q9BZA0 68 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 NELFAQ9H3P2 528 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 PIEZO2Q9H5I5 2752 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 SIAEQ9HAT2 523 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 EMC7Q9NPA0 242 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 TRIM36Q9NQ86 728 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 CYB5R1Q9UHQ9 305 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 GNG8Q9UK08 70 aa12.07□□□□□ -0.48
CCDC40-209ENST00000573474 MBD3L4A6NDZ8 208 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 MBD3L3A6NE82 208 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 CCDC160A6NGH7 325 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 MBD3L5A6NJ08 208 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 ZNF587BE7ETH6 402 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 CCRL2O00421 344 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 PRRG2O14669 202 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 MAGEB4O15481 346 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 KRT8P05787 483 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 EDNRAP25101 427 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 TGFBR2P37173 567 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 OR3A2P47893 321 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 TMBIM6P55061 237 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 TAS2R43P59537 309 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 ROM1Q03395 351 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 MRPL28Q13084 256 aaKnown RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 GPR50Q13585 617 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 CEACAM16Q2WEN9 425 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 RTL6Q6ICC9 239 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 FAM220AQ7Z4H9 259 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 ANKRD13BQ86YJ7 626 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 MBD3L2Q8NHZ7 208 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 ZNF420Q8TAQ5 688 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-209ENST00000573474 HAVCR2Q8TDQ0 301 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 UFD1Q92890 307 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 NABP1Q96AH0 204 aa12.06□□□□□ -0.48
CCDC40-209ENST00000573474 ALKBH3Q96Q83 286 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms