RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OIP5O43482 229 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 MYOGP15173 224 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 CAPZA1P52907 286 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 HSD17B7P56937 341 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 SRSF5Q13243 272 aaKnown RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ELP2Q6IA86 826 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 NUP54Q7Z3B4 507 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ADGRE4PQ86SQ3 457 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 KCNRGQ8N5I3 272 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 JAGN1Q8N5M9 183 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 AVL9Q8NBF6 648 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 OR5T2Q8NGG2 359 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 OR52H1Q8NGJ2 320 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 OR5M8Q8NGP6 311 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 OR1J4Q8NGS1 313 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ELSPBP1Q96BH3 223 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ZBTB8AQ96BR9 441 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 SEH1LQ96EE3 360 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 MRPS24Q96EL2 167 aaKnown RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 MMABQ96EY8 250 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 CMKLR1Q99788 373 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 KCNK15Q9H427 330 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 MYOZ1Q9NP98 299 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF107Q9UII5 783 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 IL33O95760 270 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 PLATP00750 562 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 AKR1D1P51857 326 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 MC2RQ01718 297 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 MELKQ14680 651 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ZMYND11Q15326 602 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 PRTGQ2VWP7 1150 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 GLYATL3Q5SZD4 288 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM225Q6GV28 225 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 GPBAR1Q8TDU6 330 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 TAAR8Q969N4 342 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 SLC25A36Q96CQ1 311 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 PRRT1Q99946 306 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 TICRRQ7Z2Z1 1910 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 KIAA0100Q14667 2235 aaKnown RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 TRAV36DV7A0A075B6V5 113 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 A0A1W2PQF6 199 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 METTL21EPA6NDL7 271 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 C17orf105B2RV13 164 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 HCRTR1O43613 425 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 FOXS1O43638 330 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 NSA2O95478 260 aaKnown RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 RAB3AP20336 220 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 DLSTP36957 453 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 RABIFP47224 123 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF169Q14929 603 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 CBLN3Q6UW01 205 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF615Q8N8J6 731 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 THAP6Q8TBB0 222 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 LRRC46Q96FV0 321 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 SLC25A44Q96H78 314 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 AMELYQ99218 206 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 VRK1Q99986 396 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 TINAGL1Q9GZM7 467 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-207ENST00000572253 B9D1Q9UPM9 204 aa9.72□□□□□ -0.85
CCDC40-207ENST00000572253 BCL2L11O43521 198 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 HCRTR2O43614 444 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.85
CCDC40-207ENST00000572253 ACHEP22303 614 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 EGR4Q05215 589 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF345Q14585 488 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 RNASE10Q5GAN6 216 aaKnown RBP9.71□□□□□ -0.85
CCDC40-207ENST00000572253 PARM1Q6UWI2 310 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 INO80EQ8NBZ0 244 aaPredicted RBP9.71□□□□□ -0.85
CCDC40-207ENST00000572253 CLRN3Q8NCR9 226 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 LAT2Q9GZY6 243 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 HHLA2Q9UM44 414 aa9.71□□□□□ -0.85
CCDC40-207ENST00000572253 URB1O60287 2271 aaKnown RBP9.71□□□□□ -0.85
CCDC40-207ENST00000572253 FAM25EA8MYX2 175 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 GMFGO60234 142 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 SLC16A7O60669 478 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 GPANK1O95872 356 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 CD8AP01732 235 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 CSN2P05814 226 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 GP1BBP13224 206 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 LUMP51884 338 aaPredicted RBP9.71□□□□□ -0.86
CCDC40-207ENST00000572253 ETFDHQ16134 617 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 LRRC37A5PQ49AS3 106 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 ATPAF1Q5TC12 328 aaPredicted RBP9.71□□□□□ -0.86
CCDC40-207ENST00000572253 OR1J2Q8NGS2 313 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 PHYHIPLQ96FC7 376 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 SLC41A2Q96JW4 573 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 S1PR5Q9H228 398 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 PNO1Q9NRX1 252 aaKnown RBP9.71□□□□□ -0.86
CCDC40-207ENST00000572253 TAS2R4Q9NYW5 299 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 TRAV14DV4A0A0A6YYC5 116 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 OR2W5A6NFC9 320 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 NUDT21O43809 227 aaKnown RBP9.71□□□□□ -0.86
CCDC40-207ENST00000572253 RORAP35398 523 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 PPICP45877 212 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 RPL27P61353 136 aaKnown RBP9.71□□□□□ -0.86
CCDC40-207ENST00000572253 DHRS2Q13268 280 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 EIF2B1Q14232 305 aaKnown RBP9.71□□□□□ -0.86
CCDC40-207ENST00000572253 HLA-DQA1Q5Y7H0 255 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 C11orf87Q6NUJ2 197 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 ACOT7LQ6ZUV0 252 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms