RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OR52D1Q9H346 318 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 CDH20Q9HBT6 801 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 CCNB1IP1Q9NPC3 277 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 FBXO9Q9UK97 447 aaPredicted RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 LYVE1Q9Y5Y7 322 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 IMPA2O14732 288 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 OR10H3O60404 316 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 TXNDC12O95881 172 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 PTHP01270 115 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 SCG5P05408 212 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 CST2P09228 141 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 FAM157BP0CG42 384 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 CTLA4P16410 223 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 MSR1P21757 451 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 APEX1P27695 318 aaKnown RBP11.21□□□□□ -0.61
CNOT1-220ENST00000569916 GSSP48637 474 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 EVX1P49640 407 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 PSG4Q00888 419 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 HSF2Q03933 536 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 C1orf94Q6P1W5 598 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 PGBD2Q6P3X8 592 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 DPY19L2P2Q6ZN68 376 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 PTCHD4Q6ZW05 846 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 TRPM8Q7Z2W7 1104 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 ADCK1Q86TW2 530 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 LRP11Q86VZ4 500 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 DHFR2Q86XF0 187 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 OR1J2Q8NGS2 313 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 ASB9Q96DX5 294 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 POM121Q96HA1 1249 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 CLPTM1LQ96KA5 538 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 POM121L2Q96KW2 1035 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 SYT3Q9BQG1 590 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 ZNF416Q9BWM5 594 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 WNT5BQ9H1J7 359 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 SYT4Q9H2B2 425 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 MAGIXQ9H6Y5 334 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 VSX1Q9NZR4 365 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-220ENST00000569916 MYEF2Q9P2K5 600 aaKnown RBP11.21□□□□□ -0.61
CNOT1-220ENST00000569916 IER3IP1Q9Y5U9 82 aa11.21□□□□□ -0.61
CNOT1-220ENST00000569916 VWC2LB2RUY7 222 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 SOCS2O14508 198 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 UBOX5O94941 541 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 PPP1R3DO95685 299 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 APEHP13798 732 aaKnown RBP11.2□□□□□ -0.62
CNOT1-220ENST00000569916 SLC25A16P16260 332 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 STOMP27105 288 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 APLNRP35414 380 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 IFNGR2P38484 337 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 HMGA2P52926 109 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 ERVS71-1P61550 626 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 RFX4Q33E94 735 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
CNOT1-220ENST00000569916 OR4C15Q8NGM1 316 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 AKR7LQ8NHP1 331 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 CCDC124Q96CT7 223 aaKnown RBP11.2□□□□□ -0.62
CNOT1-220ENST00000569916 OR2H1Q9GZK4 316 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 RAB1BQ9H0U4 201 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 OR51B6Q9H340 312 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 MYOZ1Q9NP98 299 aaPredicted RBP11.2□□□□□ -0.62
CNOT1-220ENST00000569916 EMC7Q9NPA0 242 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 VNN3Q9NY84 501 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 TMCC3Q9ULS5 477 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 FZR1Q9UM11 496 aa11.2□□□□□ -0.62
CNOT1-220ENST00000569916 LOC100509620A0A075B734 347 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 M0R233 179 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 TNFRSF11BO00300 401 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 ACOT8O14734 319 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 SYNGR3O43761 229 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 SLC16A7O60669 478 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 KRT36O76013 467 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 ADRA2AP08913 450 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 PCSK6P29122 969 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 SLC6A6P31641 620 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 CDKN2AP42771 156 aaKnown RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 GUCA1AP43080 201 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 PDLIM4P50479 330 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 PCBD1P61457 104 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 LOXL1Q08397 574 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 TSPAN31Q12999 210 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 MAD2L1BPQ15013 274 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 ZNF770Q6IQ21 691 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 RGS7BPQ6MZT1 257 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 UGT2A3Q6UWM9 527 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 ZNF620Q6ZNG0 422 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 SYT9Q86SS6 491 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 OR9Q2Q8NGE9 314 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 GNPDA2Q8TDQ7 276 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 SAMD8Q96LT4 415 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 FOXN4Q96NZ1 517 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 ERMAPQ96PL5 475 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 BTBD10Q9BSF8 475 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 TRIM15Q9C019 465 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 LRMDAQ9H2I8 198 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms