RNA–Protein interactions for RNA: ENST00000569030.5

CLN3-237, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-237ENST00000569030 FOXL2NBQ6ZUU3 175 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 AKR7LQ8NHP1 331 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 FNDC8Q8TC99 324 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 NSMCE2Q96MF7 247 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 PIMREGQ9BSJ6 248 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 KCNN2Q9H2S1 579 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 MYOZ1Q9NP98 299 aaPredicted RBP15.78■□□□□ 0.12
CLN3-237ENST00000569030 IL20RAQ9UHF4 553 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 DUSP13Q9UII6 198 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 CUBNO60494 3623 aa15.78■□□□□ 0.12
CLN3-237ENST00000569030 MXRA5Q9NR99 2828 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 LOC100509620A0A075B734 347 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 IGHV4-61A0A0C4DH41 118 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 LYNX1G3V0Z9 82 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 M0R233 179 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 NDUFB2O95178 105 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 STAMBPO95630 424 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 CLPTM1O96005 669 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 LYNX1P0DP58 116 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 ITGA2P17301 1181 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 STOMP27105 288 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 UCP2P55851 309 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 MXRA7P84157 204 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 KRT72Q14CN4 511 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 C16orf89Q6UX73 402 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 OR1J2Q8NGS2 313 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 RASD2Q96D21 266 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 RSRC1Q96IZ7 334 aaKnown RBP15.77■□□□□ 0.12
CLN3-237ENST00000569030 WNT5BQ9H1J7 359 aa15.77■□□□□ 0.12
CLN3-237ENST00000569030 COL6A5A8TX70 2615 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 A0A1W2PPL8 197 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 IMPA2O14732 288 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 LCKP06239 509 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 ERCC1P07992 297 aaPredicted RBP15.76■□□□□ 0.11
CLN3-237ENST00000569030 CST2P09228 141 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 IGHV4-31P0DP07 118 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 CCNOP22674 350 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 APLNRP35414 380 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 ENDOGQ14249 297 aaKnown RBP15.76■□□□□ 0.11
CLN3-237ENST00000569030 ALKBH6Q3KRA9 238 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 C6orf52Q5T4I8 152 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 RGS7BPQ6MZT1 257 aaPredicted RBP15.76■□□□□ 0.11
CLN3-237ENST00000569030 UGT2A3Q6UWM9 527 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 ZNF786Q8N393 782 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 UBASH3BQ8TF42 649 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 POM121L2Q96KW2 1035 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 ZNF570Q96NI8 536 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 ZNF416Q9BWM5 594 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 OR2H1Q9GZK4 316 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 BPESC1Q9GZL8 116 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 LRMDAQ9H2I8 198 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 MS4A5Q9H3V2 200 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 NRIP3Q9NQ35 241 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 NDE1Q9NXR1 346 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
CLN3-237ENST00000569030 TEX13CA0A0J9YWL9 993 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 PRSS37A4D1T9 235 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 UNC119BA6NIH7 251 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 A8MV72 311 aaPredicted RBP15.75■□□□□ 0.11
CLN3-237ENST00000569030 B2RBV5 119 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 DYNC1I1O14576 645 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 GADD45GO95257 159 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 NAT2P11245 290 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 ZNF250P15622 560 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 CTLA4P16410 223 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 MSR1P21757 451 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 GIFP27352 417 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 WNT5AP41221 380 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 RAD52P43351 418 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 SPIBQ01892 262 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 SPATS1Q496A3 300 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 ZER1Q7Z7L7 766 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 ZNF101Q8IZC7 436 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 NSL1Q96IY1 281 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 GPX7Q96SL4 187 aaPredicted RBP15.75■□□□□ 0.11
CLN3-237ENST00000569030 EMC7Q9NPA0 242 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 IL1RAPQ9NPH3 570 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 POLE4Q9NR33 117 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 TIMM10BQ9Y5J6 103 aa15.75■□□□□ 0.11
CLN3-237ENST00000569030 FBN1P35555 2871 aaKnown RBP15.74■□□□□ 0.11
CLN3-237ENST00000569030 IGLV3-9A0A075B6K5 115 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 A0A1W2PPW3 197 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 C5orf49A4QMS7 147 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 KIAA1324LA8MWY0 1029 aaPredicted RBP15.74■□□□□ 0.11
CLN3-237ENST00000569030 SOCS2O14508 198 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 XKRYO14609 159 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 AHCYL1O43865 530 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 FAM107AO95990 144 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 HPXP02790 462 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 FABP3P05413 133 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 SDHAP31040 664 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 GUCA1AP43080 201 aaPredicted RBP15.74■□□□□ 0.11
CLN3-237ENST00000569030 MNAT1P51948 309 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 SMIM11AP58511 58 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 KRR1Q13601 381 aaKnown RBP15.74■□□□□ 0.11
CLN3-237ENST00000569030 RIN1Q13671 783 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 ELFN2Q5R3F8 820 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 OTPQ5XKR4 325 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 CYB5R2Q6BCY4 276 aa15.74■□□□□ 0.11
CLN3-237ENST00000569030 ZNF774Q6NX45 483 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms