RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 H2BFMP0C1H6 154 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 ACTBL2Q562R1 376 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 C1orf189Q5VU69 101 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 TMEM215Q68D42 235 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 ZNF425Q6IV72 752 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CLEC9AQ6UXN8 241 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 Q6ZRG5 221 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 LINC00346Q8IVM7 164 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 OR2G2Q8NGZ5 317 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 OR4K15Q8NH41 348 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 SECTM1Q8WVN6 248 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 SPSB2Q99619 263 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 WDR76Q9H967 626 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 PARPBPQ9NWS1 579 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 C14orf166Q9Y224 244 aaKnown RBP9.93□□□□□ -0.82
PALB2-206ENST00000568219 B3GALT1Q9Y5Z6 326 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 PIN1P1O15428 100 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 P2RX6O15547 441 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CTAG2O75638 210 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 GLCEO94923 617 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CTSEP14091 401 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 LAG3P18627 525 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 HRH1P35367 487 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 PRPS1P60891 318 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CSNK2A1P68400 391 aaPredicted RBP9.93□□□□□ -0.82
PALB2-206ENST00000568219 SLC18B1Q6NT16 456 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 C17orf99Q6UX52 265 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CSNK2A3Q8NEV1 391 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 SLC2A12Q8TD20 617 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 CA5BP1Q8WTZ4 195 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 LURAP1Q96LR2 239 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 PRDM7Q9NQW5 492 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.93□□□□□ -0.82
PALB2-206ENST00000568219 DHCR7Q9UBM7 475 aaKnown RBP9.93□□□□□ -0.82
PALB2-206ENST00000568219 ST6GALNAC2Q9UJ37 374 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 KCNG2Q9UJ96 466 aa9.93□□□□□ -0.82
PALB2-206ENST00000568219 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ADAP1O75689 374 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FGF18O76093 207 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ABLIM3O94929 683 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 AHSA1O95433 338 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 OPN1LWP04000 364 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 PET100P0DJ07 73 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 OMGP23515 440 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 EMDP50402 254 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 RASGEF1BQ0VAM2 473 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 PABPC1L2AQ5JQF8 200 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FAM109BQ6ICB4 259 aaPredicted RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 KIRREL2Q6UWL6 708 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ETV3LQ6ZN32 361 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ZPLD1Q8TCW7 415 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 GIMAP5Q96F15 307 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 TBL1XR1Q9BZK7 514 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 UFSP2Q9NUQ7 469 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 GFOD1Q9NXC2 390 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 RNF186Q9NXI6 227 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 RHBDD3Q9Y3P4 386 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 DOCK1Q14185 1865 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ABCD3P28288 659 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 GLP1RP43220 463 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 SLC6A9P48067 706 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ARRB1P49407 418 aaPredicted RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 EMP2P54851 167 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 S100A12P80511 92 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 DUSP8Q13202 625 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 SGCAQ16586 387 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FIGLAQ6QHK4 219 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 Q6ZNB5 142 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ZNF251Q9BRH9 671 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 RNF208Q9H0X6 261 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 IL21Q9HBE4 155 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 TMED7Q9Y3B3 224 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 PCYT1BQ9Y5K3 369 aaPredicted RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 TMEM269A0A1B0GVZ9 245 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 TMEM212A6NML5 194 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 K7EPK0 472 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 OR2T1O43869 369 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FGF17O60258 216 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 THEGLP0DJG4 465 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 DPP4P27487 766 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 CTNNB1P35222 781 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FXYD4P59646 89 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 NKX6-1P78426 367 aaPredicted RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 SLC7A9P82251 487 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 METRNLQ641Q3 311 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 HIST2H3AQ71DI3 136 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FJX1Q86VR8 437 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 ZNF561Q8N587 486 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FAM71E2Q8N5Q1 922 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 RAB3CQ96E17 227 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 FAM71F1Q96KD3 344 aaPredicted RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 ESRP2Q9H6T0 727 aaKnown RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 MBNL1Q9NR56 388 aaKnown RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 XIRP1Q702N8 1843 aaKnown RBP9.92□□□□□ -0.82
PALB2-206ENST00000568219 ZNF236Q9UL36 1845 aa9.92□□□□□ -0.82
PALB2-206ENST00000568219 LCTP09848 1927 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 A0A1W2PPH5 198 aa9.91□□□□□ -0.82
PALB2-206ENST00000568219 A0A1W2PQU0 124 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms