RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 LYVE1Q9Y5Y7 322 aa21.7■■□□□ 1.06
FANCA-228ENST00000567943 CUBNO60494 3623 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 A0A1W2PPL8 197 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 PRSS37A4D1T9 235 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 TNFRSF11BO00300 401 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 ACOT8O14734 319 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 GPRIN2O60269 458 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 MMP7P09237 267 aaPredicted RBP21.69■■□□□ 1.06
FANCA-228ENST00000567943 DSCR9P59020 149 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 GALK2Q01415 458 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 FAM98BQ52LJ0 330 aaKnown RBP21.69■■□□□ 1.06
FANCA-228ENST00000567943 C1orf94Q6P1W5 598 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 SVOPLQ8N434 492 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 SLC30A7Q8NEW0 376 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 GNPDA2Q8TDQ7 276 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 C10orf105Q8TEF2 133 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 SLC7A6OSQ96CW6 309 aaPredicted RBP21.69■■□□□ 1.06
FANCA-228ENST00000567943 CCNB1IP1Q9NPC3 277 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 SPEF1Q9Y4P9 236 aa21.69■■□□□ 1.06
FANCA-228ENST00000567943 SOCS2O14508 198 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 PPP1R3DO95685 299 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 ZNF32P17041 273 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 GUCA1AP43080 201 aaPredicted RBP21.68■■□□□ 1.06
FANCA-228ENST00000567943 RPS6KA3P51812 740 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 HMGA2P52926 109 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 PLP2Q04941 152 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 TRAP1Q12931 704 aaKnown RBP21.68■■□□□ 1.06
FANCA-228ENST00000567943 FAM27BQ5VT28 67 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 PGBD2Q6P3X8 592 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 ZCCHC24Q8N2G6 241 aaKnown RBP21.68■■□□□ 1.06
FANCA-228ENST00000567943 POP5Q969H6 163 aaKnown RBP21.68■■□□□ 1.06
FANCA-228ENST00000567943 TRIM15Q9C019 465 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 OR52D1Q9H346 318 aa21.68■■□□□ 1.06
FANCA-228ENST00000567943 IQCMA0A1B0GVH7 501 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 AHCYL1O43865 530 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 CCL2P13500 99 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 LAP3P28838 519 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 GSSP48637 474 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 PPOXP50336 477 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 HSF2Q03933 536 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 PPP1R8Q12972 351 aaKnown RBP21.67■■□□□ 1.06
FANCA-228ENST00000567943 RFX4Q33E94 735 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 PABPC1L2AQ5JQF8 200 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 FOXL2NBQ6ZUU3 175 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 OR9Q2Q8NGE9 314 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 OR4C15Q8NGM1 316 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 FAM168AQ92567 244 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 VRK1Q99986 396 aaPredicted RBP21.67■■□□□ 1.06
FANCA-228ENST00000567943 BTBD10Q9BSF8 475 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 C1orf198Q9H425 327 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 CDH20Q9HBT6 801 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 CMAHPQ9Y471 501 aa21.67■■□□□ 1.06
FANCA-228ENST00000567943 IMPA2O14732 288 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 PTHP01270 115 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 SLC6A6P31641 620 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 TSPAN31Q12999 210 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 PAQR4Q8N4S7 273 aaPredicted RBP21.66■■□□□ 1.06
FANCA-228ENST00000567943 SAMD8Q96LT4 415 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 ERMAPQ96PL5 475 aaPredicted RBP21.66■■□□□ 1.06
FANCA-228ENST00000567943 SYT4Q9H2B2 425 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 RERGLQ9H628 205 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 VNN3Q9NY84 501 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 SLC7A8Q9UHI5 535 aa21.66■■□□□ 1.06
FANCA-228ENST00000567943 TXNDC12O95881 172 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 CST2P09228 141 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 CTLA4P16410 223 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 MSR1P21757 451 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 APEX1P27695 318 aaKnown RBP21.65■■□□□ 1.06
FANCA-228ENST00000567943 GLRXP35754 106 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 TBC1D28Q2M2D7 210 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 OR2T5Q6IEZ7 315 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 PGM2L1Q6PCE3 622 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 PTCHD4Q6ZW05 846 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 ADCK1Q86TW2 530 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 ADGRG5Q8IZF4 528 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 LINC00471Q8N535 108 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 CPEB3Q8NE35 698 aaKnown RBP21.65■■□□□ 1.06
FANCA-228ENST00000567943 OR1J2Q8NGS2 313 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 OR2T29Q8NH02 315 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 FOXN4Q96NZ1 517 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 IFT27Q9BW83 186 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 MRPL37Q9BZE1 423 aaKnown RBP21.65■■□□□ 1.06
FANCA-228ENST00000567943 REEP1Q9H902 201 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 POLE4Q9NR33 117 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 VSX1Q9NZR4 365 aaPredicted RBP21.65■■□□□ 1.06
FANCA-228ENST00000567943 SAMHD1Q9Y3Z3 626 aaKnown RBP21.65■■□□□ 1.06
FANCA-228ENST00000567943 U3KQV3 271 aa21.65■■□□□ 1.06
FANCA-228ENST00000567943 VWC2LB2RUY7 222 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 SLC16A7O60669 478 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 CCNB2O95067 398 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 SCG5P05408 212 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 RAP2AP10114 183 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 APEHP13798 732 aaKnown RBP21.64■■□□□ 1.05
FANCA-228ENST00000567943 APLNRP35414 380 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 CDKN2AP42771 156 aaKnown RBP21.64■■□□□ 1.05
FANCA-228ENST00000567943 LOXL1Q08397 574 aaPredicted RBP21.64■■□□□ 1.05
FANCA-228ENST00000567943 ZNF620Q6ZNG0 422 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 AKR7LQ8NHP1 331 aa21.64■■□□□ 1.05
FANCA-228ENST00000567943 MRPL24Q96A35 216 aaKnown RBP21.64■■□□□ 1.05
FANCA-228ENST00000567943 LRMDAQ9H2I8 198 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms