RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MSX2P35548 267 aaPredicted RBP12.54□□□□□ -0.4
FANCA-220ENST00000566409 WNT5AP41221 380 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 LIMS1P48059 325 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 FXYD6P3P58550 94 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 PLP2Q04941 152 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 DGCR6Q14129 220 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 TBC1D28Q2M2D7 210 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 TMEM255AQ5JRV8 349 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 FAM122BQ7Z309 247 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 PIGWQ7Z7B1 504 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 YIPF5Q969M3 257 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 FAM46AQ96IP4 442 aaKnown RBP12.54□□□□□ -0.4
FANCA-220ENST00000566409 Q96M85 177 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 GPA33Q99795 319 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 FUZQ9BT04 418 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 ARL8BQ9NVJ2 186 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 CD300AQ9UGN4 299 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 RPS6KA6Q9UK32 745 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 SIGLEC7Q9Y286 467 aa12.54□□□□□ -0.4
FANCA-220ENST00000566409 LOC100289279A0A1B0GTE1 492 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 SLC22A23A1A5C7 686 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 IMPA2O14732 288 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 LMX1BO60663 402 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 PTHP01270 115 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 SEMG1P04279 462 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 LCKP06239 509 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 CD14P08571 375 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 CST2P09228 141 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 RHCEP18577 417 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 RAD52P43351 418 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 OMPP47874 163 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 HSF2Q03933 536 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
FANCA-220ENST00000566409 MESTQ5EB52 335 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 FAM205BPQ63HN1 556 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 UGT2A3Q6UWM9 527 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 THSD4Q6ZMP0 1018 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 CYP4Z1Q86W10 505 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 SYNPRQ8TBG9 265 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 GTF3AQ92664 365 aaKnown RBP12.53□□□□□ -0.4
FANCA-220ENST00000566409 DHRS1Q96LJ7 313 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 SNX18Q96RF0 628 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 OR2H1Q9GZK4 316 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 CCNB1IP1Q9NPC3 277 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 TAAR3PQ9P1P4 343 aa12.53□□□□□ -0.4
FANCA-220ENST00000566409 A0A1W2PPW3 197 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 A6NIZ1 184 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 NR2C1P13056 603 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 HSD17B1P14061 328 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 CCNOP22674 350 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 APLNRP35414 380 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 RPL4P36578 427 aaKnown RBP12.52□□□□□ -0.41
FANCA-220ENST00000566409 MAGEB1P43366 347 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 KLF3P57682 345 aaPredicted RBP12.52□□□□□ -0.41
FANCA-220ENST00000566409 RAP1BP61224 184 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 RAP1AP62834 184 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 GNGT1P63211 74 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 ZNF774Q6NX45 483 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 RRM2BQ7LG56 351 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 OR52J3Q8NH60 311 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 FNDC8Q8TC99 324 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 RASD2Q96D21 266 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 BCL2L14Q9BZR8 327 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
FANCA-220ENST00000566409 LRMDAQ9H2I8 198 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 KCNN2Q9H2S1 579 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 CHODLQ9H9P2 273 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 EMC7Q9NPA0 242 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 GRHPRQ9UBQ7 328 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.41
FANCA-220ENST00000566409 TMEM5Q9Y2B1 443 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 V9GYQ6 96 aa12.52□□□□□ -0.41
FANCA-220ENST00000566409 A0A1W2PPL8 197 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 C5orf49A4QMS7 147 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 C17orf100A8MU93 164 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 WNT9BO14905 357 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 RP2O75695 350 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 TGFAP01135 160 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 NGFP01138 241 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 IGHV3-13P01766 116 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 FAM157CP0CG43 387 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 CTLA4P16410 223 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 CHN2P52757 468 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 FGD3Q5JSP0 725 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 FAM120AOSQ5T036 256 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 OTPQ5XKR4 325 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 FAM166AQ6J272 317 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 RFPL4BQ6ZWI9 263 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms