RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 OR4A15Q8NGL6 344 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SPPL2AQ8TCT8 520 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 GRHL3Q8TE85 626 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ACOT12Q8WYK0 555 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SLC25A46Q96AG3 418 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 LYZL4Q96KX0 146 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF354BQ96LW1 612 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SDHCQ99643 169 aaPredicted RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CCM2Q9BSQ5 444 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 REEP4Q9H6H4 257 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 NT5DC2Q9H857 520 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ANKRA2Q9H9E1 313 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 IL26Q9NPH9 171 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF275Q9NSD4 429 aaPredicted RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 IL36AQ9UHA7 158 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TBC1D24Q9ULP9 559 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TMCC3Q9ULS5 477 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 DIMT1Q9UNQ2 313 aaKnown RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TP53TG5Q9Y2B4 290 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 GSTK1Q9Y2Q3 226 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 LSM2Q9Y333 95 aaKnown RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 OR51B4Q9Y5P0 310 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 RNF215Q9Y6U7 377 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SPTA1P02549 2419 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C5orf42Q9H799 3197 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 LOC100506127A0A0U1RQW1 187 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM129A0AVI4 362 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MGAT4DA6NG13 374 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 C16orf97H3BN30 126 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SGK494L7N484 410 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SLC19A2O60779 497 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MFN2O95140 757 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GADD45GO95257 159 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 C1QBP02746 253 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CATP04040 527 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 STSP08842 583 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PRKAR1AP10644 381 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GSTM3P21266 225 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GTF2E2P29084 291 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MAT2AP31153 395 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FGF9P31371 208 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 RAB28P51157 221 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ERVFC1-1P60608 527 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CX3CL1P78423 397 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF763Q0D2J5 394 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CHIT1Q13231 466 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SCARB2Q14108 478 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SPHARQ15513 63 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 DEFB109BQ30KR1 87 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GLYR1Q49A26 553 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 BCL7AQ4VC05 210 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FBXO48Q5FWF7 155 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PDZK1Q5T2W1 519 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FRMPD2BQ6IN97 320 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FAM151BQ6UXP7 276 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CASP12Q6UXS9 341 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM182Q6ZP80 229 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 VTCN1Q7Z7D3 282 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SLC7A5P1Q8MH63 180 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CYP4Z2PQ8N1L4 340 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 THAP8Q8NA92 274 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ASZ1Q8WWH4 475 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PNPLA2Q96AD5 504 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TPD52L3Q96J77 140 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 OPALINQ96PE5 141 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MCCC1Q96RQ3 725 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 EFCAB11Q9BUY7 163 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 UCK2Q9BZX2 261 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SHARPINQ9H0F6 387 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 OR51E2Q9H255 320 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 RNF121Q9H920 327 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 RPRD1BQ9NQG5 326 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 POLE4Q9NR33 117 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FARSBQ9NSD9 589 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ACOXLQ9NUZ1 547 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MS4A12Q9NXJ0 267 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 EXOSC1Q9Y3B2 195 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 V9GYH0 126 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 AHCTF1Q8WYP5 2266 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SETXQ7Z333 2677 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 A0A1W2PPQ1 181 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 A4D1N5 150 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TUBAL3A6NHL2 446 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 DUXAA6NLW8 204 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 IQCF5A8MTL0 148 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MYL12BO14950 172 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TOX3O15405 576 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CHST10O43529 356 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ORC5O43913 435 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PSIP1O75475 530 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SEMA3DO95025 777 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 RAB36O95755 333 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CD160O95971 181 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SPNP16150 400 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 IDSP22304 550 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 UQCRC2P22695 453 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 MYL9P24844 172 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TEAD1P28347 426 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 IDH2P48735 452 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 AP2S1P53680 142 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms