RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CD3GP09693 182 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 JMJD7P0C870 316 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 SGCBQ16585 318 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 FLYWCH1Q4VC44 716 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 CARD17Q5XLA6 110 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 UQCC3Q6UW78 93 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 SLCO4C1Q6ZQN7 724 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ESPNLQ6ZVH7 1005 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 PRICKLE2Q7Z3G6 844 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 B3GNT8Q7Z7M8 397 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ZNF808Q8N4W9 903 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 SCGB1C1Q8TD33 95 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ZNRF4Q8WWF5 429 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 OR2M4Q96R27 311 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 GFM1Q96RP9 751 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 OCSTAMPQ9BR26 566 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 HDAC8Q9BY41 377 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 MYOZ1Q9NP98 299 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 QPCTLQ9NXS2 382 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 KLHL9Q9P2J3 617 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 CAMK2AQ9UQM7 478 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 HRNRQ86YZ3 2850 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 MEIS3P1A6NDR6 274 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 XRCC2O43543 280 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 TNFRSF1AP19438 455 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 IL11P20809 199 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 MIDNQ504T8 468 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 FAM76BQ5HYJ3 339 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 DCAF12Q5T6F0 453 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 OR52W1Q6IF63 320 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 MRPL21Q7Z2W9 205 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 KLHDC1Q8N7A1 406 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 SYT14Q8NB59 555 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 TRMT61AQ96FX7 289 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 TIMP4Q99727 224 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 OR51J1Q9H342 316 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 DPAGT1Q9H3H5 408 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 KLRF1Q9NZS2 232 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 MIOXQ9UGB7 285 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 RALGAPA1Q6GYQ0 2036 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 LTBP2Q14767 1821 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 NPIPB8E9PQR5 432 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 SCAMP2O15127 329 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 HCKP08631 526 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 CD6P30203 668 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 PRLHRP49683 370 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 C17orf67Q0P5P2 114 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 FZD5Q13467 585 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 STEAP1BQ6NZ63 245 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 FAHD2BQ6P2I3 314 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 SVBPQ8N300 66 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 DEFB123Q8N688 67 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 CPT1CQ8TCG5 803 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 TM4SF18Q96CE8 201 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 FAHD2AQ96GK7 314 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ISG20L2Q9H9L3 353 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 C20orf141Q9NUB4 165 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 TMEFF2Q9UIK5 374 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 ATP6V1G2-DDX39BF2Z307 99 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 GFYI3L273 518 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 NUPL2O15504 423 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 KLF4O43474 513 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 RFPL3O75679 317 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 EPPINO95925 133 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 RAP2BP61225 183 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 KCNJ10P78508 379 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 DPTQ07507 201 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 FUT5Q11128 374 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 SLC22A16Q86VW1 577 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 KCNRGQ8N5I3 272 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 MMABQ96EY8 250 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 ZCCHC3Q9NUD5 404 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 ZNF226Q9NYT6 803 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ST3GAL6Q9Y274 331 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 HIF3AQ9Y2N7 669 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ANKRD11Q6UB99 2663 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 SEC14L6B5MCN3 397 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 CNOT4O95628 575 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 CBX7O95931 251 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ANOS1P23352 680 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 UCP2P55851 309 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 NHLH1Q02575 133 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 RNPS1Q15287 305 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 CTF1Q16619 201 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 AARDQ4LEZ3 155 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ELFN2Q5R3F8 820 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 ZBTB37Q5TC79 503 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 MYPOPQ86VE0 399 aaPredicted RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 TEX19Q8NA77 164 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 CADM4Q8NFZ8 388 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 OR4F15Q8NGB8 312 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 OR13C8Q8NGS7 320 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 SMPDL3BQ92485 455 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 COQ10AQ96MF6 247 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 GLIPR2Q9H4G4 154 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 PLEKHA2Q9HB19 425 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 C1GALT1Q9NS00 363 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 LIN7CQ9NUP9 197 aaKnown RBP3.06□□□□□ -1.92
CHD9-213ENST00000564845 PISDQ9UG56 409 aa3.06□□□□□ -1.92
CHD9-213ENST00000564845 DENND4AQ7Z401 1863 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms