RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TRIM25Q14258 630 aaKnown RBP15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 MESTQ5EB52 335 aa15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 SMARCD3Q6STE5 483 aa15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 DPY19L2P2Q6ZN68 376 aa15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 ZER1Q7Z7L7 766 aa15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 RASD2Q96D21 266 aa15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 GPX7Q96SL4 187 aaPredicted RBP15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 MRPL37Q9BZE1 423 aaKnown RBP15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 C1orf21Q9H246 121 aa15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 MYOZ1Q9NP98 299 aaPredicted RBP15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 NIPBLQ6KC79 2804 aaeCLIP15.81■□□□□ 0.12
SYNGR3-204ENST00000564642 SOCS2O14508 198 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 KRT36O76013 467 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 ADRA2AP08913 450 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 CST2P09228 141 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 FAM157BP0CG42 384 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 MSR1P21757 451 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 CCNOP22674 350 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 STOMP27105 288 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 RAD52P43351 418 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 CARTPTQ16568 116 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 RGS7BPQ6MZT1 257 aaPredicted RBP15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 THSD4Q6ZMP0 1018 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 FOXL2NBQ6ZUU3 175 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 TRPM8Q7Z2W7 1104 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 ALDH16A1Q8IZ83 802 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 PAQR4Q8N4S7 273 aaPredicted RBP15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 CPEB3Q8NE35 698 aaKnown RBP15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 GNPDA2Q8TDQ7 276 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 C10orf105Q8TEF2 133 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 NEU4Q8WWR8 484 aaPredicted RBP15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 POP5Q969H6 163 aaKnown RBP15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 LRGUKQ96M69 825 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 GPA33Q99795 319 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 SYT3Q9BQG1 590 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 OR51B6Q9H340 312 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 TAS2R1Q9NYW7 299 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 DUSP13Q9UII6 198 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 TIMM10BQ9Y5J6 103 aa15.8■□□□□ 0.12
SYNGR3-204ENST00000564642 SYNGR3O43761 229 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 SNAP29O95721 258 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 LCKP06239 509 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 UCP2P55851 309 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 FXYD6P3P58550 94 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 SELENOVP59797 346 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 PSG4Q00888 419 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 MSMPQ1L6U9 139 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 RFX4Q33E94 735 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 LCN8Q6JVE9 175 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 ZCCHC24Q8N2G6 241 aaKnown RBP15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 AKR7LQ8NHP1 331 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 FANK1Q8TC84 345 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 ERMAPQ96PL5 475 aaPredicted RBP15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 BCL2L14Q9BZR8 327 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 MS4A5Q9H3V2 200 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 RERGLQ9H628 205 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 MAGIXQ9H6Y5 334 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 POLE4Q9NR33 117 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 EIF3KQ9UBQ5 218 aaKnown RBP15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 REV1Q9UBZ9 1251 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 FZR1Q9UM11 496 aa15.79■□□□□ 0.12
SYNGR3-204ENST00000564642 LOC390937A0A1W2PQ73 354 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 TCRBV5S2A0A599 114 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 C12orf71A8MTZ7 269 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 M0R233 179 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 TNFRSF11BO00300 401 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 SLC16A7O60669 478 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 KHDRBS3O75525 346 aaKnown RBP15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 FPR3P25089 353 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 PCSK6P29122 969 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 SLC6A6P31641 620 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 GDI2P50395 445 aaKnown RBP15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 HMGA2P52926 109 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 PPP2R2BQ00005 443 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 MS4A2Q01362 244 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 FAM98BQ52LJ0 330 aaKnown RBP15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 C1orf94Q6P1W5 598 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 SYT9Q86SS6 491 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 ADCK1Q86TW2 530 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 LRP11Q86VZ4 500 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 LINC00471Q8N535 108 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 ICA1LQ8NDH6 482 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 C11orf40Q8WZ69 217 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 ASB9Q96DX5 294 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 PIMREGQ9BSJ6 248 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 WACQ9BTA9 647 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 THTPAQ9BU02 230 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 ZNF416Q9BWM5 594 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 OR2H1Q9GZK4 316 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 SYT4Q9H2B2 425 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 OR52D1Q9H346 318 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 GPR160Q9UJ42 338 aa15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 CHD3Q12873 2000 aaKnown RBP15.78■□□□□ 0.12
SYNGR3-204ENST00000564642 A0A1W2PPW3 197 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 C5orf49A4QMS7 147 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 NDUFS8O00217 210 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 PPP1R3DO95685 299 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 TXNDC12O95881 172 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 APEHP13798 732 aaKnown RBP15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 TSPAN31Q12999 210 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms