RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 SLC25A18Q9H1K4 315 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 C1orf198Q9H425 327 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 HEXA-AS1Q9H8Q6 139 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 ELOVL3Q9HB03 270 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 ZNF304Q9HCX3 659 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 IFT46Q9NQC8 304 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 C2orf42Q9NWW7 574 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 SLC2A8Q9NY64 477 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 WSB2Q9NYS7 404 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-249ENST00000564606 MBD2Q9UBB5 411 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 GHRLQ9UBU3 117 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 OPN4Q9UHM6 478 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 MKL2Q9ULH7 1088 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 GTF2A1LQ9UNN4 478 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 MEMO1Q9Y316 297 aa6.9□□□□□ -1.3
ATXN3-249ENST00000564606 IGKV1D-42A0A075B6H8 117 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 FXYD6-FXYD2A0A087WZ82 144 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 TMED7-TICAM2A0A0A6YYA0 188 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 PIGBOS1A0A0B4J2F0 54 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 A0A1B0GVC2 190 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ANKUB1A6NFN9 424 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 A6NIN4 97 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 VSTM2BA6NLU5 285 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 CHURC1-FNTBB4DL54 471 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 H0Y8X5 98 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SCAMP1O15126 338 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 MAGEB4O15481 346 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SUSD5O60279 629 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SLC16A7O60669 478 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 NTN1O95631 604 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 WNT11O96014 354 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ITGB2P05107 769 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 F13BP05160 661 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SPARCP09486 303 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 H2BFMP0C1H6 154 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ANKRD34CP0C6C1 535 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 CD37P11049 281 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 HLA-GP17693 338 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 PTNP21246 168 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 CD34P28906 385 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 RAD52P43351 418 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 LSSP48449 732 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 HCCSP53701 268 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 NANOS3P60323 173 aaKnown RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SRSF4Q08170 494 aaKnown RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 HYAL1Q12794 435 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 EIF2B1Q14232 305 aaKnown RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 C2orf76Q3KRA6 126 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 MESTQ5EB52 335 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 C1orf100Q5SVJ3 147 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ARHGAP40Q5TG30 622 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 AWAT2Q6E213 333 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 TMEM225Q6GV28 225 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 H1FNTQ75WM6 255 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SYT13Q7L8C5 426 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ZNF627Q7L945 461 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OVCH2Q7RTZ1 564 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR2W3Q7Z3T1 314 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 CATSPERDQ86XM0 798 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 TMEFF1Q8IYR6 380 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SLC22A24Q8N4F4 322 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ADPRHL1Q8NDY3 354 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 PLPP5Q8NEB5 264 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 BEST4Q8NFU0 473 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 TSTD1Q8NFU3 115 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR4N2Q8NGD1 307 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR51D1Q8NGF3 324 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR4C16Q8NGL9 310 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR1N1Q8NGS0 311 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR2AJ1Q8NGZ0 328 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SLC25A44Q96H78 314 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ADOQ96SZ5 270 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 MAP3K3Q99759 626 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 AIFM2Q9BRQ8 373 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 URM1Q9BTM9 101 aaKnown RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 OR8D2Q9GZM6 311 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 FXYD6Q9H0Q3 95 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SYT4Q9H2B2 425 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 ZFP57Q9NU63 452 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 FBLN5Q9UBX5 448 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 KLK11Q9UBX7 282 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 C19orf25Q9UFG5 118 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 B3GALT5Q9Y2C3 310 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
ATXN3-249ENST00000564606 TMED7Q9Y3B3 224 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 COL4A2P08572 1712 aa6.89□□□□□ -1.31
ATXN3-249ENST00000564606 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PRRC2BQ5JSZ5 2229 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 A0A1B0GX78 115 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 TCRBV16S1A1N1A0A5B0 115 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 D6RAR5 112 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 LMO7DNF2Z398 122 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PYCARD-AS1I3L0S3 204 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 GOSR2O14653 212 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ARPC5O15511 151 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 GMDSO60547 372 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 TSPAN2O60636 221 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SDC3O75056 442 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 CD8AP01732 235 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms