RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 APEHP13798 732 aaKnown RBP17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 CCNOP22674 350 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 LAP3P28838 519 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 OMPP47874 163 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 MESTQ5EB52 335 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 SAMD4BQ5PRF9 694 aaKnown RBP17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 FOXL2NBQ6ZUU3 175 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 FAM122BQ7Z309 247 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF786Q8N393 782 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 FNDC8Q8TC99 324 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 RASD2Q96D21 266 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 DHRS1Q96LJ7 313 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 CDRT15Q96T59 188 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 GRHPRQ9UBQ7 328 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 CD300AQ9UGN4 299 aa17.13■□□□□ 0.33
SHCBP1-203ENST00000564272 TEX13CA0A0J9YWL9 993 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 ARPC2O15144 300 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 DCTN3O75935 186 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 NAT2P11245 290 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 STOMP27105 288 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 GIFP27352 417 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 PSG4Q00888 419 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 FAM27BQ5VT28 67 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 THSD4Q6ZMP0 1018 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 HIPK1Q86Z02 1210 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 RSRC1Q96IZ7 334 aaKnown RBP17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF570Q96NI8 536 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 FUZQ9BT04 418 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 OR2H1Q9GZK4 316 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 NDEL1Q9GZM8 345 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 WNT5BQ9H1J7 359 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 MS4A5Q9H3V2 200 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 IL20RAQ9UHF4 553 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 SIGLEC7Q9Y286 467 aa17.12■□□□□ 0.33
SHCBP1-203ENST00000564272 MALRD1Q5VYJ5 2156 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 LOC100509620A0A075B734 347 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 LRP5LA4QPB2 252 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 NCR1O76036 304 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 HPXP02790 462 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 SCG5P05408 212 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 CST2P09228 141 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF23P17027 643 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 WNT5AP41221 380 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 GZMKP49863 264 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 UCP2P55851 309 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 KLF3P57682 345 aaPredicted RBP17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 FXYD6P3P58550 94 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 SPIBQ01892 262 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 KRR1Q13601 381 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 ENDOGQ14249 297 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 KRT72Q14CN4 511 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 NKPD1Q17RQ9 610 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 DEFB107AQ8IZN7 70 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 SYNPRQ8TBG9 265 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 PYURFQ96I23 114 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 POM121L2Q96KW2 1035 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 NSMCE2Q96MF7 247 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF416Q9BWM5 594 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 BCL2L14Q9BZR8 327 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 EMC7Q9NPA0 242 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 POLE4Q9NR33 117 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 TAAR3PQ9P1P4 343 aa17.11■□□□□ 0.33
SHCBP1-203ENST00000564272 IGLV3-9A0A075B6K5 115 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 C5orf49A4QMS7 147 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 UNC119BA6NIH7 251 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 XKRYO14609 159 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 PTP4A3O75365 173 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 NDUFB2O95178 105 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF250P15622 560 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 MSR1P21757 451 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 RAD52P43351 418 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 MXRA7P84157 204 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 GLO1Q04760 184 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 RIN1Q13671 783 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 CHRFAM7AQ494W8 412 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 ELFN2Q5R3F8 820 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF774Q6NX45 483 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 UGT2A3Q6UWM9 527 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 C16orf89Q6UX73 402 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 ZNF101Q8IZC7 436 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 OR1J1Q8NGS3 322 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 C11orf40Q8WZ69 217 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 MSI2Q96DH6 328 aaKnown RBP17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 GPX7Q96SL4 187 aaPredicted RBP17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 GPA33Q99795 319 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 SOX7Q9BT81 388 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 AURKCQ9UQB9 309 aa17.1■□□□□ 0.33
SHCBP1-203ENST00000564272 PRSS37A4D1T9 235 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 IMPA2O14732 288 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 CTLA4P16410 223 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 ITGA2P17301 1181 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 IL2RGP31785 369 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 GUCA1AP43080 201 aaPredicted RBP17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 GDI2P50395 445 aaKnown RBP17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 TRIP10Q15642 601 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 SPATA46Q5T0L3 261 aa17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 GTF3AQ92664 365 aaKnown RBP17.09■□□□□ 0.33
SHCBP1-203ENST00000564272 SNX18Q96RF0 628 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms