RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 EMC7Q9NPA0 242 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 B3GAT2Q9NPZ5 323 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 POLE4Q9NR33 117 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 SLC7A10Q9NS82 523 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 KCNG2Q9UJ96 466 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ZNF835Q9Y2P0 537 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 CAB39Q9Y376 341 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 TTLL8A6PVC2 850 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 ZNF670-ZNF695F2Z2N8 137 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 LALBAP00709 142 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 SPARCP09486 303 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 ALOX5APP20292 161 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 PSMB9P28065 219 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 ZNF84P51523 738 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 TIGD6Q17RP2 521 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 CEACAM16Q2WEN9 425 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 CDONQ4KMG0 1287 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 TEX30Q5JUR7 227 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 RIPPLY2Q5TAB7 128 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 ZNF322Q6U7Q0 402 aaPredicted RBP8.96□□□□□ -0.98
SMG1-208ENST00000563448 GPR141Q7Z602 305 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 LINC00346Q8IVM7 164 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 GCNT2Q8N0V5 402 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 RPRMLQ8N4K4 120 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 OR52N1Q8NH53 320 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 CPT1CQ8TCG5 803 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 NABP1Q96AH0 204 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 COG8Q96MW5 612 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 AMELYQ99218 206 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 MNTQ99583 582 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 PRSS50Q9UI38 385 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 LAMP5Q9UJQ1 280 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 TLN1Q9Y490 2541 aaKnown RBP8.96□□□□□ -0.98
SMG1-208ENST00000563448 ZZEF1O43149 2961 aa8.96□□□□□ -0.98
SMG1-208ENST00000563448 PRRC2CQ9Y520 2896 aaKnown RBP8.96□□□□□ -0.98
SMG1-208ENST00000563448 FIGNL2A6NMB9 653 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 RPL36A-HNRNPH2H7BZ11 118 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 TOXO94900 526 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 EDN3P14138 238 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 PTGER4P35408 488 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 FOXG1P55316 489 aaPredicted RBP8.95□□□□□ -0.98
SMG1-208ENST00000563448 OR12D2P58182 307 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 SIRPAP78324 504 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 ROR2Q01974 943 aaKnown RBP8.95□□□□□ -0.98
SMG1-208ENST00000563448 FOXF2Q12947 444 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 SGCAQ16586 387 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 TP53I3Q53FA7 332 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 ZNF684Q5T5D7 378 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 OR2A2Q6IF42 318 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 TMPRSS11AQ6ZMR5 421 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 FAM214BQ7L5A3 538 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 DOLPP1Q86YN1 238 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 ZNF100Q8IYN0 542 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 OR10H5Q8NGA6 315 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 THEM6Q8WUY1 208 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 C4orf36Q96KX1 117 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 OPALINQ96PE5 141 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 MGLLQ99685 303 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 TM9SF2Q99805 663 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 NELFAQ9H3P2 528 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 OR6C65A6NJZ3 312 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 H3BSA7 217 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 J3QLW9 94 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 PSMD9O00233 223 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 PHYHO14832 338 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 WNT11O96014 354 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 HSMCR30P0CW71 290 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 ZNF19P17023 458 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 LIPAP38571 399 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 KIR2DL2P43627 348 aaPredicted RBP8.95□□□□□ -0.98
SMG1-208ENST00000563448 OR3A2P47893 321 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 MRPS34P82930 218 aaKnown RBP8.95□□□□□ -0.98
SMG1-208ENST00000563448 EIF2B1Q14232 305 aaKnown RBP8.95□□□□□ -0.98
SMG1-208ENST00000563448 ARMCX4Q5H9R4 360 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 FOXB2Q5VYV0 432 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 CORO6Q6QEF8 472 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 C3P1Q6ZMU1 363 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 KLBQ86Z14 1044 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 YIPF6Q96EC8 236 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 ABHD6Q9BV23 337 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 RBM38Q9H0Z9 239 aaKnown RBP8.95□□□□□ -0.98
SMG1-208ENST00000563448 TMEM38BQ9NVV0 291 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 CYB5R1Q9UHQ9 305 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 LHFPL6Q9Y693 200 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 TMEM14AQ9Y6G1 99 aa8.95□□□□□ -0.98
SMG1-208ENST00000563448 PRRG2O14669 202 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 SLC19A2O60779 497 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 KRT33AO76009 404 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 HOXD4P09016 255 aaPredicted RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 MSR1P21757 451 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 TGFBR2P37173 567 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 LSM6P62312 80 aaKnown RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 ACTA2P62736 377 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ACTG2P63267 376 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ACSM1Q08AH1 577 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 FAPQ12884 760 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 MLLT11Q13015 90 aaPredicted RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 ENDOGQ14249 297 aaKnown RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 STK11Q15831 433 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms