RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 HHIPL1Q96JK4 782 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 MRPL37Q9BZE1 423 aaKnown RBP5.76□□□□□ -1.49
CLK3-212ENST00000563418 ADARB2Q9NS39 739 aaKnown RBP5.76□□□□□ -1.49
CLK3-212ENST00000563418 HS3ST4Q9Y661 456 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 SMIM28A0A1B0GU29 152 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 GAGE1Q13065 139 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 KLF9Q13886 244 aaPredicted RBP5.76□□□□□ -1.49
CLK3-212ENST00000563418 TAF1CQ15572 869 aaPredicted RBP5.76□□□□□ -1.49
CLK3-212ENST00000563418 Q6ZSR9 355 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 ARRDC1Q8N5I2 433 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 TMEM104Q8NE00 496 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 OR5AU1Q8NGC0 362 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 GSX1Q9H4S2 264 aaPredicted RBP5.76□□□□□ -1.49
CLK3-212ENST00000563418 Q9N2J8 555 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 ANKRD31Q8N7Z5 1873 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 TCRBV5S1A1TA0A578 114 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 DDTLA6NHG4 134 aaPredicted RBP5.76□□□□□ -1.49
CLK3-212ENST00000563418 NDUFS4O43181 175 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 PPP1R3DO95685 299 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 EPHA2P29317 976 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 OTOP2Q7RTS6 562 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 C1QL4Q86Z23 238 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 MMP21Q8N119 569 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 CHRDL1Q9BU40 450 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 PPP1R3EQ9H7J1 279 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 MTFP1Q9UDX5 166 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 PCOLCE2Q9UKZ9 415 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 ZMIZ1Q9ULJ6 1067 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 SLC7A7Q9UM01 511 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 PCDHGC4Q9Y5F7 938 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 BCORQ6W2J9 1755 aa5.76□□□□□ -1.49
CLK3-212ENST00000563418 A0A1W2PPV4 95 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 HIDE1A8MVS5 230 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PNMTP11086 282 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CD200P41217 278 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 DHRS2Q13268 280 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 OR7A5Q15622 319 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 OR51T1Q8NGJ9 327 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ARRDC2Q8TBH0 407 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 NUDT11Q96G61 164 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 HIST1H2AAQ96QV6 131 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 IL20RAQ9UHF4 553 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CHD5Q8TDI0 1954 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 TNRC6CQ9HCJ0 1690 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 RBFOX3A6NFN3 312 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 KDM4EB2RXH2 506 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 SCDO00767 359 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GRM6O15303 877 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CXCL2P19875 107 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 BRICD5Q6PL45 260 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CD300LDQ6UXZ3 194 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 B3GALT5Q9Y2C3 310 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CHST2Q9Y4C5 530 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3EA0A087X179 549 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 LRG1P02750 347 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 SERPINE2P07093 398 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CHRNB4P30926 498 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 DCTDP32321 178 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ADRA1AP35348 466 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 FAM189BP81408 668 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ZNF90Q03938 601 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 MSMO1Q15800 293 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 SLC10A6Q3KNW5 377 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GRASPQ7Z6J2 395 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 MRGPRX4Q96LA9 322 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ZNF681Q96N22 645 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 TIMM29Q9BSF4 260 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GDE1Q9NZC3 331 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PIM2Q9P1W9 311 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 TCFL5Q9UL49 500 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ZNF337Q9Y3M9 751 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 TIMM13Q9Y5L4 95 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 SULT2B1O00204 365 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 SEMG1P04279 462 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PRR35P0CG20 571 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ACAA2P42765 397 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 SMAD4Q13485 552 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 GAMTQ14353 236 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PNLIPRP3Q17RR3 467 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ENTPD8Q5MY95 495 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 SAMD13Q5VXD3 122 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ZNF787Q6DD87 383 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GCNT2Q8N0V5 402 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 OR9A1PQ8NGU1 263 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ZMYND19Q96E35 227 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 TEX37Q96LM6 180 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 DNAJC4Q9NNZ3 241 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 VAX2Q9UIW0 290 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 C2orf78A6NCI8 922 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 NDUFS6O75380 124 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 LGALS2P05162 132 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PRPH2P23942 346 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 NPBWR1P48145 328 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 TCTAP57738 103 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 RPL24P83731 157 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 ZNF92Q03936 586 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GAB1Q13480 694 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 DTWD2Q8NBA8 298 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 NUP43Q8NFH3 380 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 OR1P1Q8NH06 330 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms