RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CYSLTR2Q9NS75 346 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 DDX28Q9NUL7 540 aaKnown RBP11.03□□□□□ -0.64
SF3B3-202ENST00000562722 GMNCA6NCL1 334 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 ZSCAN5BA6NJL1 495 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 SHOX2O60902 331 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-202ENST00000562722 TNFRSF1BP20333 461 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 RBM34P42696 430 aaKnown RBP11.02□□□□□ -0.65
SF3B3-202ENST00000562722 GUCA1AP43080 201 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-202ENST00000562722 TAF11Q15544 211 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 VMACQ2NL98 169 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 AWAT1Q58HT5 328 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 ZMAT1Q5H9K5 638 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 NKAIN4Q8IVV8 208 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 KLF14Q8TD94 323 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-202ENST00000562722 TMEM239Q8WW34 195 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 GEMIN6Q8WXD5 167 aaKnown RBP11.02□□□□□ -0.65
SF3B3-202ENST00000562722 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.65
SF3B3-202ENST00000562722 POM121L2Q96KW2 1035 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 SEPHS2Q99611 448 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 SMURF2Q9HAU4 748 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 C20orf141Q9NUB4 165 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 BAG5Q9UL15 447 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 UGT2A1Q9Y4X1 527 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 PPIAL4AQ9Y536 164 aa11.02□□□□□ -0.65
SF3B3-202ENST00000562722 LOC100509620A0A075B734 347 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 A0A1W2PPL8 197 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 TIMM8AO60220 97 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 OR5F1O95221 314 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 LIPAP38571 399 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 MMP15P51511 669 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 ARHGDIAP52565 204 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 PPP1CBP62140 327 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 UBA52P62987 128 aaKnown RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 PSG4Q00888 419 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 PIN1Q13526 163 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 ALG10Q5BKT4 473 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 ARMCX4Q5H9R4 360 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 BEND6Q5SZJ8 279 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 ARMC4Q5T2S8 1044 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 MBNL2Q5VZF2 373 aaKnown RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 RFPL4BQ6ZWI9 263 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 HDAC2Q92769 488 aaKnown RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 NABP1Q96AH0 204 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 RBP7Q96R05 134 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 DCLRE1CQ96SD1 692 aaKnown RBP11.01□□□□□ -0.65
SF3B3-202ENST00000562722 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 NTN4Q9HB63 628 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 MSL2Q9HCI7 577 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 RIMS3Q9UJD0 308 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 MED31Q9Y3C7 131 aa11.01□□□□□ -0.65
SF3B3-202ENST00000562722 IGKV1D-43A0A0B4J1Z2 117 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 FOXH1O75593 365 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 UBOX5O94941 541 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 SBK2P0C263 348 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 LAP3P28838 519 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ZNF133P52736 654 aaPredicted RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 PCBD1P61457 104 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 TNFAIP6P98066 277 aaPredicted RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 CYLC2Q14093 348 aaPredicted RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 LAPTM4AQ15012 233 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 FAM27BQ5VT28 67 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ZNF774Q6NX45 483 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ARL9Q6T311 187 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 CCDC80Q76M96 950 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 C1orf174Q8IYL3 243 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ZDHHC22Q8N966 263 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 DIRC2Q96SL1 478 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ECSITQ9BQ95 431 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 POLR2J2Q9GZM3 115 aaKnown RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 POLR2J3Q9H1A7 115 aaKnown RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 TXNIPQ9H3M7 391 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ELOVL3Q9HB03 270 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 NPHS2Q9NP85 383 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 INTS9Q9NV88 658 aaKnown RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 CGGBP1Q9UFW8 167 aaPredicted RBP11□□□□□ -0.65
SF3B3-202ENST00000562722 OPN4Q9UHM6 478 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 ZDHHC8Q9ULC8 765 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 PCDHGB1Q9Y5G3 927 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 TIMM10BQ9Y5J6 103 aa11□□□□□ -0.65
SF3B3-202ENST00000562722 DYSFO75923 2080 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 PIP5K1CO60331 668 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 ABHD16AO95870 558 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 NGFP01138 241 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 IFNA14P01570 189 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 TNFSF4P23510 183 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 OR1E2P47887 323 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 CRYBA2P53672 197 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 HNRNPA0Q13151 305 aaKnown RBP10.99□□□□□ -0.65
SF3B3-202ENST00000562722 MTX3Q5HYI7 312 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 RABL3Q5HYI8 236 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 TMEM255AQ5JRV8 349 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 ZER1Q7Z7L7 766 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 IGFN1Q86VF2 1251 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 KLHL36Q8N4N3 616 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 CLDN22Q8N7P3 220 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 SIGLECL1Q8N7X8 197 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 TSPEARQ8WU66 669 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 ATP6V1G3Q96LB4 118 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms