RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RGPD3A6NKT7 1758 aaPredicted RBP4.15□□□□□ -1.74
SMG1-204ENST00000561940 RGPD4Q7Z3J3 1758 aa4.15□□□□□ -1.74
SMG1-204ENST00000561940 MYOM3Q5VTT5 1437 aa4.15□□□□□ -1.74
SMG1-204ENST00000561940 A0A1B0GVI7 797 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 WI2-2373I1.2A0A1W2PRP0 233 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 H0Y9J4 135 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 RAB29O14966 203 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 EIF3HO15372 352 aaKnown RBP eCLIP4.15□□□□□ -1.756e-14■■□□□ 13.6
SMG1-204ENST00000561940 OR2J3O76001 311 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 TDGF1P13385 188 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 CRISP2P16562 243 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 CCNCP24863 283 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 RPS10P46783 165 aaKnown RBP4.15□□□□□ -1.75
SMG1-204ENST00000561940 TFPI2P48307 235 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 TDGF1P3P51864 188 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 CCNHP51946 323 aaPredicted RBP4.15□□□□□ -1.75
SMG1-204ENST00000561940 PRRX1P54821 245 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 ACTA2P62736 377 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 ACTG2P63267 376 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 ACTC1P68032 377 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 ACTA1P68133 377 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 ZNF92Q03936 586 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 AQP6Q13520 282 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 GUCA2BQ16661 112 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 FRMPD2BQ6IN97 320 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 LINC00173Q6ZV60 143 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 EID2Q8N6I1 236 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 CEP112Q8N8E3 955 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 OR1N2Q8NGR9 330 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 DTX3LQ8TDB6 740 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 SLC29A1Q99808 456 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 KCTD14Q9BQ13 255 aaPredicted RBP4.15□□□□□ -1.75
SMG1-204ENST00000561940 PITPNC1Q9UKF7 332 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 F11RQ9Y624 299 aaKnown RBP4.15□□□□□ -1.75
SMG1-204ENST00000561940 PXDNLA1KZ92 1463 aa4.15□□□□□ -1.75
SMG1-204ENST00000561940 KIAA0232Q92628 1395 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 NAIPQ13075 1403 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 SSH2Q76I76 1423 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 A6NDX4 124 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 CLOCKO15516 846 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMG1-204ENST00000561940 DRD3P35462 400 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 RFX3P48380 749 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 NCBP2P52298 156 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMG1-204ENST00000561940 CRISP3P54108 245 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 YWHAGP61981 247 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMG1-204ENST00000561940 ARHGAP19Q14CB8 494 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 RFX4Q33E94 735 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 RAET1LQ5VY80 246 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 ZNF530Q6P9A1 599 aaPredicted RBP4.14□□□□□ -1.75
SMG1-204ENST00000561940 ZNF433Q8N7K0 673 aaPredicted RBP4.14□□□□□ -1.75
SMG1-204ENST00000561940 Q8N9W7 124 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 OR7G2Q8NG99 324 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 OR2G3Q8NGZ4 309 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 OR5B3Q8NH48 314 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 GPR151Q8TDV0 419 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 ACMSDQ8TDX5 336 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 RNF138Q8WVD3 245 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 DNAJC19Q96DA6 116 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 RNF185Q96GF1 192 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 GABARAPL3Q9BY60 117 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 DNTTIP1Q9H147 329 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 OR51M1Q9H341 326 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 ZNF331Q9NQX6 463 aaPredicted RBP4.14□□□□□ -1.75
SMG1-204ENST00000561940 RAB20Q9NX57 234 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 CACNG2Q9Y698 323 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 COL14A1Q05707 1796 aaKnown RBP4.14□□□□□ -1.75
SMG1-204ENST00000561940 ANKRD30AQ9BXX3 1397 aa4.14□□□□□ -1.75
SMG1-204ENST00000561940 PLCH1Q4KWH8 1693 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 ATP7BP35670 1465 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 SMCO2A6NFE2 343 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 TCP11X1B4DZS4 312 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 C9JVG2 144 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 F6UB75 175 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 SLC31A2O15432 143 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 CLIC3O95833 236 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 KRT6AP02538 564 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 FTH1P02794 183 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 IGHV3-43DP0DP04 118 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 HPGDP15428 266 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 TMED10P49755 219 aaKnown RBP4.13□□□□□ -1.75
SMG1-204ENST00000561940 ZNF133P52736 654 aaPredicted RBP4.13□□□□□ -1.75
SMG1-204ENST00000561940 SOHLH1Q5JUK2 328 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 FBXL13Q8NEE6 735 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 OR10G9Q8NGN4 311 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 SLC7A13Q8TCU3 470 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 CCDC126Q96EE4 140 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 RACGAP1Q9H0H5 632 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 ASB8Q9H765 288 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 TMEM185BQ9H7F4 350 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 NEK6Q9HC98 313 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 ZNF160Q9HCG1 818 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 VANGL2Q9ULK5 521 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 PCNTO95613 3336 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 NACAE9PAV3 2078 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 ABCC11Q96J66 1382 aa4.13□□□□□ -1.75
SMG1-204ENST00000561940 NALCNQ8IZF0 1738 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 ARHGEF28Q8N1W1 1705 aaKnown RBP4.12□□□□□ -1.75
SMG1-204ENST00000561940 NRXN1Q9ULB1 1477 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms