RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
AC055717.2-201ENST00000561864 ETV7Q9Y603 341 aa11.3□□□□□ -0.6
AC055717.2-201ENST00000561864 R4GMQ9 66 aa11.3□□□□□ -0.6
AC055717.2-201ENST00000561864 A0A1W2PNR3 127 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 PLA2G10O15496 165 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 DNPH1O43598 174 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 PAHP00439 452 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 P04436 131 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 SFTPDP35247 375 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 RPS18P62269 152 aaKnown RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 C19orf57Q0VDD7 668 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 TMEM176BQ3YBM2 270 aaPredicted RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 AKAP14Q86UN6 197 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 LGALS14Q8TCE9 139 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 ST7LQ8TDW4 575 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 TSEN15Q8WW01 171 aaKnown RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 RFT1Q96AA3 541 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 FOXN4Q96NZ1 517 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 PIGQQ9BRB3 760 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 NAA11Q9BSU3 229 aaPredicted RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 B3GNT4Q9C0J1 378 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 HDHD2Q9H0R4 259 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 P4HTMQ9NXG6 502 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 CAMK2AQ9UQM7 478 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 PCDHGA9Q9Y5G4 932 aaKnown RBP11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 PCNX3Q9H6A9 2034 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 DNAH14Q0VDD8 3507 aa11.29□□□□□ -0.6
AC055717.2-201ENST00000561864 LINC00854A0A1B0GVQ3 168 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 CTDSPLO15194 276 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TLX3O43711 291 aaPredicted RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SLC43A1O75387 559 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SRSF10O75494 262 aaKnown RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TPPPO94811 219 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 VAMP5O95183 116 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TRAPPC2P0DI81 140 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TRAPPC2BP0DI82 140 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 ZNF43P17038 809 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 ACHEP22303 614 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 LAP3P28838 519 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SRD5A2P31213 254 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 DCTDP32321 178 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SOX2P48431 317 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 CSNK2A1P68400 391 aaPredicted RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 FOXK1P85037 733 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 Q0VFX4 171 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 MADCAM1Q13477 382 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 POU4F3Q15319 338 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 AGAP6Q5VW22 663 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TMEM225Q6GV28 225 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 OR7E24Q6IFN5 339 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SPATC1Q76KD6 591 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 DCXRQ7Z4W1 244 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SYT9Q86SS6 491 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 UBQLNLQ8IYU4 475 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 ZNF433Q8N7K0 673 aaPredicted RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 RNF133Q8WVZ7 376 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 KCNE4Q8WWG9 221 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 C11orf40Q8WZ69 217 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 TRIM63Q969Q1 353 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 MCHR2Q969V1 340 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 AGAP4Q96P64 663 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 NEDD4LQ96PU5 975 aa11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 SMAD5Q99717 465 aaKnown RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
AC055717.2-201ENST00000561864 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 OR2M5A3KFT3 312 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ANXA2P2A6NMY6 339 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ZNF726A6NNF4 738 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 LYRM1O43325 122 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ZIC3O60481 467 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 MPZL1O95297 269 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ISG15P05161 165 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ANXA2P07355 339 aaKnown RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 H2BFMP0C1H6 154 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 UBCP0CG48 685 aaKnown RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 FSTP19883 344 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 MMP15P51511 669 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 RAC1P63000 192 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 H3F3AP84243 136 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 MFGE8Q08431 387 aaPredicted RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 KCNMB1Q16558 191 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 HIST3H3Q16695 136 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ACER2Q5QJU3 275 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 HES5Q5TA89 166 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ZNF468Q5VIY5 522 aaPredicted RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ZNF704Q6ZNC4 412 aaPredicted RBP11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 ZNF227Q86WZ6 799 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 DUSP18Q8NEJ0 188 aa11.27□□□□□ -0.61
AC055717.2-201ENST00000561864 C15orf40Q8WUR7 153 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms