RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 OPN4Q9UHM6 478 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ANGPT4Q9Y264 503 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 BBIP1A8MTZ0 92 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 M0QX08 132 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 PRSS23O95084 383 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 THY1P04216 161 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 HIST1H2ABP04908 130 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 HKR1P10072 659 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 APLNRP35414 380 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF81P51508 661 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 MMP15P51511 669 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF133P52736 654 aaPredicted RBP10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 CLRN1P58418 232 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 SLC3A1Q07837 685 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 FOXL1Q12952 345 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 NPTX1Q15818 432 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 UNQ6126/PRO20091Q6UXV3 157 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 HIST3H2AQ7L7L0 130 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 C1orf174Q8IYL3 243 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 C11orf65Q8NCR3 313 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 CPEB3Q8NE35 698 aaKnown RBP10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 GPR32P1Q8NGA4 272 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 GTF3AQ92664 365 aaKnown RBP10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 DVL3Q92997 716 aaPredicted RBP10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 HIST1H2ACQ93077 130 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF347Q96SE7 839 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 PCDHAC1Q9H158 963 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF696Q9H7X3 374 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 EFCAB1Q9HAE3 211 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 WNK2Q9Y3S1 2297 aa10.04□□□□□ -0.8
CARMIL3-204ENST00000561354 TRAPPC13A5PLN9 417 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 CPSF4LA6NMK7 179 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 TMPRSS2O15393 492 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 IGHV1-46P01743 117 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 ADH4P08319 380 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 MAKP20794 623 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 STOMP27105 288 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 GCH1P30793 250 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 LIPAP38571 399 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 MRPS34P82930 218 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 HSF2Q03933 536 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 GLO1Q04760 184 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF718Q3SXZ3 478 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 RUNDC3AQ59EK9 446 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 PABPC1L2AQ5JQF8 200 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 C10orf128Q5T292 105 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 MBNL2Q5VZF2 373 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 DLEU7Q6UYE1 221 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 HDDC2Q7Z4H3 204 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 NANOGNBQ7Z5D8 188 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 PTOV1Q86YD1 416 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 PGAM4Q8N0Y7 254 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 LRRC18Q8N456 261 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 ICA1LQ8NDH6 482 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 NOXO1Q8NFA2 376 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 TSPEARQ8WU66 669 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 CCL17Q92583 94 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 MARS2Q96GW9 593 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 POM121L2Q96KW2 1035 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 CPPED1Q9BRF8 314 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 THTPAQ9BU02 230 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 KCNN2Q9H2S1 579 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 CYSLTR2Q9NS75 346 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 EIF3KQ9UBQ5 218 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 CGGBP1Q9UFW8 167 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 PCDHGB1Q9Y5G3 927 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 MGAM2Q2M2H8 2515 aa10.03□□□□□ -0.8
CARMIL3-204ENST00000561354 A0A1W2PRG6 482 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 PLSCR5A0PG75 271 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 BLOC1S5-TXNDC5H3BN57 136 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 KPNA4O00629 521 aaPredicted RBP10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 SPRY3O43610 288 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 FKBP6O75344 327 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 FOXH1O75593 365 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 OPN1SWP03999 348 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 UMPSP11172 480 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 ACADSP16219 412 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 CCNOP22674 350 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 NUDT2P50583 147 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 UGT2B15P54855 530 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 ACTR3P61158 418 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 RPL18Q07020 188 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 COQ5Q5HYK3 327 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 TMEM255AQ5JRV8 349 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 THEM4Q5T1C6 240 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 PGM2L1Q6PCE3 622 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 HACD2Q6Y1H2 254 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 PATL1Q86TB9 770 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 TSPYL5Q86VY4 417 aaPredicted RBP10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 RBM45Q8IUH3 476 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 ZNF101Q8IZC7 436 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 POU5F2Q8N7G0 328 aa10.02□□□□□ -0.81
CARMIL3-204ENST00000561354 OR4D11Q8NGI4 311 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms