RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 C9orf170A2RU37 121 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 SLC17A2O00624 439 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ARPC3O15145 178 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 IGKV1D-16P01601 117 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 CD74P04233 296 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 SLC35G6P0C7Q6 338 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 GPR143P51810 404 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 MST1LQ2TV78 715 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 GLYATL3Q5SZD4 288 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ZNF425Q6IV72 752 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 C5orf46Q6UWT4 87 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ROBO4Q8WZ75 1007 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 RRNAD1Q96FB5 475 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 RCC2Q9P258 522 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 MRPS2Q9Y399 296 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 DCDC2BA2VCK2 349 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 S100A8P05109 93 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 SFTA3P0C7M3 94 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 F2RL1P55085 397 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 CTXN1P60606 82 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 FABP9Q0Z7S8 132 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ELAVL3Q14576 367 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 SLC22A6Q4U2R8 563 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 LINC00114Q6XXX2 140 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ADAD2Q8NCV1 583 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 MCHR2Q969V1 340 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 STACQ99469 402 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 PHB2Q99623 299 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 NAA11Q9BSU3 229 aaPredicted RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 LAT2Q9GZY6 243 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 A0A1W2PPC1 479 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 C5orf52A6NGY3 159 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 TMEM212A6NML5 194 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 HEXAP06865 529 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 ADH5P11766 374 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 ZNF44P15621 663 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 MAP3K8P41279 467 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 SCAND1P57086 179 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 ELOCQ15369 112 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 TSC22D1Q15714 1073 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 OR52W1Q6IF63 320 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 CORO6Q6QEF8 472 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 SLC35D2Q76EJ3 337 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 PARGQ86W56 976 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 SLC43A2Q8N370 569 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 ACBD4Q8NC06 268 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 OR52R1Q8NGF1 315 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 RAB11FIP5Q9BXF6 653 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 CACNA1IQ9P0X4 2223 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 APEHP13798 732 aaKnown RBP14.9□□□□□ -0.02
TPM1-228ENST00000560975 PSMB6P28072 239 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 SERPINF1P36955 418 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 DMWDQ09019 674 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 ASPHD2Q6ICH7 369 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 PAPD4Q6PIY7 484 aaKnown RBP14.9□□□□□ -0.02
TPM1-228ENST00000560975 DGAT2L6Q6ZPD8 337 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 CDC20BQ86Y33 519 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 ZNF584Q8IVC4 421 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 PAQR4Q8N4S7 273 aaPredicted RBP14.9□□□□□ -0.02
TPM1-228ENST00000560975 GVQW1Q8N7I0 195 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 FAM174AQ8TBP5 190 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 EDARADDQ8WWZ3 215 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 LRRC3BQ96PB8 259 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 SPSB2Q99619 263 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 RSRP1Q9BUV0 290 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 EDEM2Q9BV94 578 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 PRMT8Q9NR22 394 aaPredicted RBP14.9□□□□□ -0.02
TPM1-228ENST00000560975 TMEM100Q9NV29 134 aa14.9□□□□□ -0.02
TPM1-228ENST00000560975 EDDM13A0A1B0GTR0 161 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 ERCC1P07992 297 aaPredicted RBP14.89□□□□□ -0.03
TPM1-228ENST00000560975 FAM157CP0CG43 387 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 CPT2P23786 658 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 CENPAP49450 140 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SQSTM1Q13501 440 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SLC25A42Q86VD7 318 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 GATSQ8NAP1 163 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SLC41A2Q96JW4 573 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SERINC2Q96SA4 455 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 KCNG2Q9UJ96 466 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 PCDHGA1Q9Y5H4 931 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SLC22A7Q9Y694 548 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 ZNF432O94892 652 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SSBP1Q04837 148 aaKnown RBP14.89□□□□□ -0.03
TPM1-228ENST00000560975 PMPCAQ10713 525 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 PRICKLE4Q2TBC4 344 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 ITPRIPL2Q3MIP1 535 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 RNASE10Q5GAN6 216 aaKnown RBP14.89□□□□□ -0.03
TPM1-228ENST00000560975 FBXO42Q6P3S6 717 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 ZNF585AQ6P3V2 769 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 BHLHE23Q8NDY6 225 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 SLC30A7Q8NEW0 376 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 CD99L2Q8TCZ2 262 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 C4orf45Q96LM5 186 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 KXD1Q9BQD3 176 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 CYTL1Q9NRR1 136 aa14.89□□□□□ -0.03
TPM1-228ENST00000560975 NOSIPQ9Y314 301 aaKnown RBP14.89□□□□□ -0.03
TPM1-228ENST00000560975 MSGN1A6NI15 193 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 F8VVB4 439 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 F8VWA3 439 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms