RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 MAGIXQ9H6Y5 334 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 TMEM160Q9NX00 188 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 GRHPRQ9UBQ7 328 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 SLC7A8Q9UHI5 535 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 AURKCQ9UQB9 309 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 FKBP7Q9Y680 259 aa13.08□□□□□ -0.32
SNRPA1-210ENST00000560383 SVEP1Q4LDE5 3571 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 SLC22A23A1A5C7 686 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 PRSS37A4D1T9 235 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 UNC119BA6NIH7 251 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 NDUFS8O00217 210 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 KRT36O76013 467 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 TXNDC12O95881 172 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 PTHP01270 115 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 IFNA2P01563 188 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 APEHP13798 732 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 FPR3P25089 353 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 SDHAP31040 664 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 RRM2P31350 389 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 MSMPQ1L6U9 139 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 DPY19L2P2Q6ZN68 376 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 DHFR2Q86XF0 187 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 SLC30A7Q8NEW0 376 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 NSMAFQ92636 917 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 MRPL24Q96A35 216 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 SORCS2Q96PQ0 1159 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 RNF121Q9H920 327 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 MYOZ1Q9NP98 299 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 CDC42EP3Q9UKI2 254 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 CMAHPQ9Y471 501 aa13.07□□□□□ -0.32
SNRPA1-210ENST00000560383 XKRYO14609 159 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 GPRIN2O60269 458 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 IGFBP1P08833 259 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 CST2P09228 141 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 ZNF32P17041 273 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 IFNGR2P38484 337 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 GSSP48637 474 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 RPS23P62266 143 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 GALK2Q01415 458 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 PLP2Q04941 152 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 RFX4Q33E94 735 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 CHRFAM7AQ494W8 412 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 SMARCD3Q6STE5 483 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 ADCK1Q86TW2 530 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 SVOPLQ8N434 492 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 LRRC18Q8N456 261 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 CPEB3Q8NE35 698 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 OR1J2Q8NGS2 313 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 ASB9Q96DX5 294 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 ZNF570Q96NI8 536 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 WACQ9BTA9 647 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 KCNN2Q9H2S1 579 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 VSX1Q9NZR4 365 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 LYVE1Q9Y5Y7 322 aa13.06□□□□□ -0.32
SNRPA1-210ENST00000560383 RTTNQ86VV8 2226 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 STAB1Q9NY15 2570 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 TEX13CA0A0J9YWL9 993 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 IQCMA0A1B0GVH7 501 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 H7C1C5 153 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 IMPA2O14732 288 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 ACOT8O14734 319 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 ARPC3O15145 178 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 OR10H3O60404 316 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 LAP3P28838 519 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 LCN6P62502 163 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 KRR1Q13601 381 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 SGCAQ16586 387 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 PABPC1L2AQ5JQF8 200 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 SYT9Q86SS6 491 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 PAQR4Q8N4S7 273 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 LINC00471Q8N535 108 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 OR4C15Q8NGM1 316 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 RASD2Q96D21 266 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 MRPL37Q9BZE1 423 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 IL20RAQ9UHF4 553 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 IER3IP1Q9Y5U9 82 aa13.05□□□□□ -0.32
SNRPA1-210ENST00000560383 VWC2LB2RUY7 222 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 UBOX5O94941 541 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 CTLA4P16410 223 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 MSR1P21757 451 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 USF1P22415 310 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 GUCA1AP43080 201 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 PDLIM4P50479 330 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 PCBD1P61457 104 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 PSG4Q00888 419 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 TRAP1Q12931 704 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 ENDOGQ14249 297 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 TBC1D28Q2M2D7 210 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 ZNF770Q6IQ21 691 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 PGBD2Q6P3X8 592 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 PGM2L1Q6PCE3 622 aa13.04□□□□□ -0.32
SNRPA1-210ENST00000560383 FANK1Q8TC84 345 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms