RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CDAP32320 146 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 MDH2P40926 338 aaKnown RBP13.9□□□□□ -0.18
HERC1-207ENST00000560316 GDI2P50395 445 aaKnown RBP13.9□□□□□ -0.18
HERC1-207ENST00000560316 CDK5R2Q13319 367 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 HLXQ14774 488 aaPredicted RBP13.9□□□□□ -0.18
HERC1-207ENST00000560316 ZNF74Q16587 644 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 HIST3H3Q16695 136 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 ZMAT1Q5H9K5 638 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 MTX3Q5HYI7 312 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 Q6YL49 198 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 SAMD8Q96LT4 415 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 SLC19A3Q9BZV2 496 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 KCNN2Q9H2S1 579 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 RMND5AQ9H871 391 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 CGGBP1Q9UFW8 167 aaPredicted RBP13.9□□□□□ -0.18
HERC1-207ENST00000560316 LRCH1Q9Y2L9 728 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 ZNF205O95201 554 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 THRBP10828 461 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 BGNP21810 368 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 FADDQ13158 208 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 ZNF774Q6NX45 483 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 UNQ6126/PRO20091Q6UXV3 157 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 EIF1ADQ8N9N8 165 aaKnown RBP13.89□□□□□ -0.19
HERC1-207ENST00000560316 OR2Z1Q8NG97 314 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 ITLN1Q8WWA0 313 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 PPP1R3CQ9UQK1 317 aa13.89□□□□□ -0.19
HERC1-207ENST00000560316 BIRC5O15392 142 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 SLC2A10O95528 541 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 PRB2P02812 416 aaPredicted RBP13.88□□□□□ -0.19
HERC1-207ENST00000560316 TNFRSF1AP19438 455 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 ERVK-25P63136 954 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 PSG4Q00888 419 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 IFFO1Q0D2I5 559 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 PSG7Q13046 419 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
HERC1-207ENST00000560316 RUSC1-AS1Q66K80 236 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 LINC00114Q6XXX2 140 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 Q6ZR03 302 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 C10orf111Q8N326 155 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 OR9I1Q8NGQ6 314 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 LINC01006Q8NI28 216 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 NABP1Q96AH0 204 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 DACT3Q96B18 629 aaPredicted RBP13.88□□□□□ -0.19
HERC1-207ENST00000560316 THOC1Q96FV9 657 aaKnown RBP13.88□□□□□ -0.19
HERC1-207ENST00000560316 SLC30A2Q9BRI3 323 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 SPATA5L1Q9BVQ7 753 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 MRPL13Q9BYD1 178 aaKnown RBP13.88□□□□□ -0.19
HERC1-207ENST00000560316 PAIP1Q9H074 479 aaKnown RBP13.88□□□□□ -0.19
HERC1-207ENST00000560316 RAD21L1Q9H4I0 556 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 SIAEQ9HAT2 523 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 NANSQ9NR45 359 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 ASH2LQ9UBL3 628 aa13.88□□□□□ -0.19
HERC1-207ENST00000560316 TMEM178BH3BS89 294 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 KPNA4O00629 521 aaPredicted RBP13.87□□□□□ -0.19
HERC1-207ENST00000560316 CLPXO76031 633 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 MELTFP08582 738 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 IDO1P14902 403 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 RPS2P15880 293 aaKnown RBP13.87□□□□□ -0.19
HERC1-207ENST00000560316 TNFSF4P23510 183 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 GNB2P62879 340 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 MRPS34P82930 218 aaKnown RBP13.87□□□□□ -0.19
HERC1-207ENST00000560316 STX3Q13277 289 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 PDCD1Q15116 288 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 SGCAQ16586 387 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 GCNT6Q5T4J0 391 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 HHATQ5VTY9 493 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 FAM205BPQ63HN1 556 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 NXNQ6DKJ4 435 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 REEP3Q6NUK4 255 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 SLC2A7Q6PXP3 512 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 Q6ZPA2 131 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 MSANTD1Q6ZTZ1 278 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 RANBP3LQ86VV4 465 aaPredicted RBP13.87□□□□□ -0.19
HERC1-207ENST00000560316 KRT73Q86Y46 540 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 KLBQ86Z14 1044 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 KIRREL3Q8IZU9 778 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 MUC20Q8N307 709 aaPredicted RBP13.87□□□□□ -0.19
HERC1-207ENST00000560316 GTF2H4Q92759 462 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 MCHR1Q99705 422 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 WNT5BQ9H1J7 359 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 POFUT1Q9H488 388 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 NOX4Q9NPH5 578 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 SLC13A4Q9UKG4 626 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 UGT2A1Q9Y4X1 527 aa13.87□□□□□ -0.19
HERC1-207ENST00000560316 IGKV1D-43A0A0B4J1Z2 117 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 MCIDASD6RGH6 385 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 G3V4G9 280 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 BLOC1S5-TXNDC5H3BN57 136 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 H3BSA7 217 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 M0R3H8 397 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 TRMUO75648 421 aaKnown RBP13.86□□□□□ -0.19
HERC1-207ENST00000560316 HIST1H2ABP04908 130 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 UMPSP11172 480 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 AQP1P29972 269 aa13.86□□□□□ -0.19
HERC1-207ENST00000560316 POLR2JP52435 117 aaKnown RBP13.86□□□□□ -0.19
HERC1-207ENST00000560316 PROK1P58294 105 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms