RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GIPRP48546 466 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 CDH12P55289 794 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 ERVS71-1P61550 626 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 MS4A2Q01362 244 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 IL1RL1Q01638 556 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 HNRNPA0Q13151 305 aaKnown RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 FADDQ13158 208 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 CAMK2DQ13557 499 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 RAB39AQ14964 217 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 NPTX1Q15818 432 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 GSG1Q2KHT4 349 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 ALG10BQ5I7T1 473 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 PAGE3Q5JUK9 113 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 INTS11Q5TA45 600 aaKnown RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 LIPNQ5VXI9 398 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 LRFN4Q6PJG9 635 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 DHRS4L2Q6PKH6 230 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 CCDC36Q8IYA8 594 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 SCAIQ8N9R8 606 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 PAPD5Q8NDF8 572 aaKnown RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 PIK3C3Q8NEB9 887 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 OR8J3Q8NGG0 315 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 OR4D11Q8NGI4 311 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 NFKBIDQ8NI38 313 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 BBS10Q8TAM1 723 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 ZFAND2BQ8WV99 257 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 DNAJA4Q8WW22 397 aaPredicted RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 GTF3AQ92664 365 aaKnown RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 TMEM54Q969K7 222 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 LRR1Q96L50 414 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 TSPAN32Q96QS1 320 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 SYT3Q9BQG1 590 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 RSRP1Q9BUV0 290 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 NARFLQ9H6Q4 476 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 ZNF696Q9H7X3 374 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 GCM1Q9NP62 436 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 DYNLRB1Q9NP97 96 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 ZNF275Q9NSD4 429 aaPredicted RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 THUMPD1Q9NXG2 353 aaKnown RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 MRPL39Q9NYK5 338 aaKnown RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 TAS2R5Q9NYW4 299 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 TREM2Q9NZC2 230 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 VAPAQ9P0L0 249 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 FBXO9Q9UK97 447 aaPredicted RBP4.95□□□□□ -1.62
USP3-215ENST00000559771 FZR1Q9UM11 496 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 USP22Q9UPT9 525 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 CMAHPQ9Y471 501 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 IGLV3-9A0A075B6K5 115 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 DHRS12A0PJE2 317 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 B4DSR2 109 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 M0R233 179 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 GMNNO75496 209 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 MFN2O95140 757 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 SERPINA5P05154 406 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 MSMBP08118 114 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 GAAP10253 952 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CD79AP11912 226 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CCL2P13500 99 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ZNF26P17031 533 aaPredicted RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 GPX2P18283 190 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ACHEP22303 614 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 SLC6A2P23975 617 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 FASP25445 335 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CALRP27797 417 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 SRP14P37108 136 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 RBMXP38159 391 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 RPL5P46777 297 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 CAPZA2P47755 286 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 COMPP49747 757 aaPredicted RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 SLC7A2P52569 658 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CRYBA2P53672 197 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 AQP4P55087 323 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 PCBP3P57721 371 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 RAB1AP62820 205 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 MRPS11P82912 194 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 CDK6Q00534 326 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 RUNX1T1Q06455 604 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 PUDPQ08623 228 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 C1DQ13901 141 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 OR1Q1Q15612 314 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 DUSP7Q16829 419 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 C6orf10Q5SRN2 563 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 REEP3Q6NUK4 255 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ULK3Q6PHR2 472 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 UGT2A3Q6UWM9 527 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 C5orf46Q6UWT4 87 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 DLEU7Q6UYE1 221 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ZNF813Q6ZN06 617 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 PXKQ7Z7A4 578 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 PTOV1Q86YD1 416 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 UEVLDQ8IX04 471 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 SLC15A3Q8IY34 581 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 LRRC17Q8N6Y2 441 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 HIPK4Q8NE63 616 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 GPR32P1Q8NGA4 272 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 RDH5Q92781 318 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 EME1Q96AY2 570 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms