RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ATRXP46100 2492 aa12.67□□□□□ -0.38
RABGGTA-209ENST00000559551 E9PI62 339 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 WNT11O96014 354 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 IGHG1P01857 330 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 OR2T7P0C7T2 308 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 RGS6P49758 472 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 OR12D2P58182 307 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF684Q5T5D7 378 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ZFP41Q8N8Y5 198 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 OR2T27Q8NH04 317 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 C17orf50Q8WW18 174 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 NSMAFQ92636 917 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF71Q9NQZ8 489 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 TGM6O95932 706 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 FAM87AP0C7U9 286 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 CD36P16671 472 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 CRABP1P29762 137 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 CLRN1P58418 232 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 RASGEF1BQ0VAM2 473 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 TP53I3Q53FA7 332 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 PDSS1Q5T2R2 415 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 RPUSD3Q6P087 351 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 DPY19L4Q7Z388 723 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF837Q96EG3 531 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 PRDM14Q9GZV8 571 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 INPP5EQ9NRR6 644 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 KCNG2Q9UJ96 466 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 CAB39Q9Y376 341 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 UGT2A1Q9Y4X1 527 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
RABGGTA-209ENST00000559551 INTS1Q8N201 2190 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 IGKV3D-15A0A087WSY6 115 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF726A6NNF4 738 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 QDPRP09417 244 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 BMP4P12644 408 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 TGFBR1P36897 503 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 UCNP55089 124 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 MLLT11Q13015 90 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 CDONQ4KMG0 1287 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 SOWAHCQ53LP3 525 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 THEM4Q5T1C6 240 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 LINGO2Q7L985 606 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 ADGRE4PQ86SQ3 457 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 KLBQ86Z14 1044 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 INTS14Q96SY0 518 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 MOV10Q9HCE1 1003 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 TIGARQ9NQ88 270 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 GLTPQ9NZD2 209 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 CAMK2AQ9UQM7 478 aa12.65□□□□□ -0.38
RABGGTA-209ENST00000559551 A0A1B0GTH9 108 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 PSMD9O00233 223 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 AQP7O14520 342 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 KHDRBS3O75525 346 aaKnown RBP12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 ALOX5APP20292 161 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 GADD45AP24522 165 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 CD40LGP29965 261 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 CDAP32320 146 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 CENPAP49450 140 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 ACTC1P68032 377 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 ACTA1P68133 377 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 IFITM3Q01628 133 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 P2RY8Q86VZ1 359 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 PHC2Q8IXK0 858 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 TRMT61AQ96FX7 289 aaKnown RBP12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 C4orf36Q96KX1 117 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 RBP7Q96R05 134 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 CLEC4AQ9UMR7 237 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 SF3B6Q9Y3B4 125 aaKnown RBP12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 GRIP1Q9Y3R0 1128 aa12.65□□□□□ -0.39
RABGGTA-209ENST00000559551 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 ZNF593O00488 134 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 UPK3AO75631 287 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 PPP5CP53041 499 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 HSF2Q03933 536 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 ACSM1Q08AH1 577 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 PCK2Q16822 640 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 THOC7Q6I9Y2 204 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 RPTNQ6XPR3 784 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 C20orf196Q8IYI0 205 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 NBEAQ8NFP9 2946 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 C11orf40Q8WZ69 217 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 OR51E2Q9H255 320 aa12.64□□□□□ -0.39
RABGGTA-209ENST00000559551 CENPBD1B2RD01 187 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 J3QLW9 94 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 ABHD16AO95870 558 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 HLA-DQA2P01906 255 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 CPEP16870 476 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 ZNF19P17023 458 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 CSNK1A1P48729 337 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 GLO1Q04760 184 aa12.63□□□□□ -0.39
RABGGTA-209ENST00000559551 TPBGQ13641 420 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms