RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ZNF99A8MXY4 864 aaPredicted RBP15.9■□□□□ 0.14
CLPX-203ENST00000558958 ZNF593O00488 134 aaPredicted RBP15.9■□□□□ 0.14
CLPX-203ENST00000558958 CCL21O00585 134 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 RGS10O43665 173 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 C1QL1O75973 258 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 RAB36O95755 333 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 IGHA1P01876 353 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 NPR2P20594 1047 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 MPGP29372 298 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 ENTPD1P49961 510 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 ADAM8P78325 824 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 SGCAQ16586 387 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 PCK2Q16822 640 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 ZNF627Q7L945 461 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 PRSS48Q7RTY5 328 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 ATCAYQ86WG3 371 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 ZNF610Q8N9Z0 462 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 TSPAN14Q8NG11 270 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 SMAP2Q8WU79 429 aaPredicted RBP15.9■□□□□ 0.14
CLPX-203ENST00000558958 HTRA1Q92743 480 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 JAM3Q9BX67 310 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 YIPF3Q9GZM5 350 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 OPN3Q9H1Y3 402 aaPredicted RBP15.9■□□□□ 0.14
CLPX-203ENST00000558958 NELFAQ9H3P2 528 aa15.9■□□□□ 0.14
CLPX-203ENST00000558958 MRPS14O60783 128 aaKnown RBP15.89■□□□□ 0.13
CLPX-203ENST00000558958 ITGA5P08648 1049 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 PSKH1P11801 424 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 ZNF823P16415 610 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 MSR1P21757 451 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 HCCSP53701 268 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 ARF1P84077 181 aaKnown RBP15.89■□□□□ 0.13
CLPX-203ENST00000558958 NRN1LQ496H8 165 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 TEX30Q5JUR7 227 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 ZNF773Q6PK81 442 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.89■□□□□ 0.13
CLPX-203ENST00000558958 SLC35F2Q8IXU6 374 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 OR10H4Q8NGA5 316 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 OR6N2Q8NGY6 317 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 PIGMQ9H3S5 423 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 SIAEQ9HAT2 523 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 EMC7Q9NPA0 242 aa15.89■□□□□ 0.13
CLPX-203ENST00000558958 SEC14L2O76054 403 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 MT-ND2P03891 347 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 OR2T7P0C7T2 308 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 B4GALT1P15291 398 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 BMP5P22003 454 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 GNLYP22749 145 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 RPS27P42677 84 aaKnown RBP15.88■□□□□ 0.13
CLPX-203ENST00000558958 SH3BGRP55822 239 aaPredicted RBP15.88■□□□□ 0.13
CLPX-203ENST00000558958 LSM6P62312 80 aaKnown RBP15.88■□□□□ 0.13
CLPX-203ENST00000558958 FAM27BQ5VT28 67 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 C9orf135Q5VTT2 229 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 RNLSQ5VYX0 342 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 ZNF813Q6ZN06 617 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 DPY19L4Q7Z388 723 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 CDC20BQ86Y33 519 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 GABRG1Q8N1C3 465 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 ACBD7Q8N6N7 88 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 OR10H5Q8NGA6 315 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 OR2T27Q8NH04 317 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 CDCA4Q9BXL8 241 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 CCDC90BQ9GZT6 254 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 KCNG2Q9UJ96 466 aa15.88■□□□□ 0.13
CLPX-203ENST00000558958 C12orf71A8MTZ7 269 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 MSTNO14793 375 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 COX5AP20674 150 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 IGHV1-2P23083 117 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 UQCRFS1P47985 274 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 ACTC1P68032 377 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 ACTA1P68133 377 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 IRF3Q14653 427 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 BEND4Q6ZU67 534 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 FJX1Q86VR8 437 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 LIX1LQ8IVB5 337 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 SLC22A24Q8N4F4 322 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 OTOSQ8NHW6 89 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 MNTQ99583 582 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 TBX5Q99593 518 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 ZNF649Q9BS31 505 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 ZNF416Q9BWM5 594 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 INPP5EQ9NRR6 644 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 TAS2R16Q9NYV7 291 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 CYB5R1Q9UHQ9 305 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 COPS3Q9UNS2 423 aa15.87■□□□□ 0.13
CLPX-203ENST00000558958 EXOSC1Q9Y3B2 195 aaKnown RBP15.87■□□□□ 0.13
CLPX-203ENST00000558958 A0A087WXM4 84 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 A0A1W2PQL4 384 aaPredicted RBP15.86■□□□□ 0.13
CLPX-203ENST00000558958 DAPL1A0PJW8 107 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 EIF4E1BA6NMX2 242 aaKnown RBP15.86■□□□□ 0.13
CLPX-203ENST00000558958 DVL2O14641 736 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 TMCC2O75069 709 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 SPARCP09486 303 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 LIMS3P0CW19 117 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 LIMS4P0CW20 117 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 SMIM18P0DKX4 95 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 OR8G3PP0DMU2 310 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 ALOX5APP20292 161 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 ETV1P50549 477 aa15.86■□□□□ 0.13
CLPX-203ENST00000558958 ENDOGQ14249 297 aaKnown RBP15.86■□□□□ 0.13
CLPX-203ENST00000558958 P2RY6Q15077 328 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms