RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 RUNX1T1Q06455 604 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SPOCK1Q08629 439 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 HNRNPA0Q13151 305 aaKnown RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 FADDQ13158 208 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SELENBP1Q13228 472 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CYLC2Q14093 348 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 SLC17A1Q14916 467 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 NRF1Q16656 503 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 IQCCQ4KMZ1 466 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 LIN52Q52LA3 116 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ENTPD8Q5MY95 495 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 OTUD3Q5T2D3 398 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 C1orf140Q5VVS0 124 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 METTL21CQ5VZV1 264 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 WBP2NLQ6ICG8 309 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 OR2A2Q6IF42 318 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 HMBOX1Q6NT76 420 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 DHRS4L2Q6PKH6 230 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CREB3L2Q70SY1 520 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 Q71RC1 249 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 C1QL2Q7Z5L3 287 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 NET1Q7Z628 596 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 MYPOPQ86VE0 399 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 KIRREL3Q8IZU9 778 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 EID3Q8N140 333 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CIARTQ8N365 385 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 ZNF433Q8N7K0 673 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 FAM86B1Q8N7N1 296 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 NRACQ8N912 160 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 OR6K3Q8NGY3 331 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 PFN4Q8NHR9 129 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 FAM222BQ8WU58 562 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 TMEM234Q8WY98 164 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SLC38A4Q969I6 547 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 DACH2Q96NX9 599 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ARHGDIGQ99819 225 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 POTEKPQ9BYX7 375 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ACTR6Q9GZN1 396 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CTDSP1Q9GZU7 261 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 PIGMQ9H3S5 423 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SPAG4Q9NPE6 437 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 MEPEQ9NQ76 525 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 EXOSC3Q9NQT5 275 aaKnown RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 SERINC1Q9NRX5 453 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 C20orf141Q9NUB4 165 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 MED29Q9NX70 200 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 TAS2R5Q9NYW4 299 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SELENONQ9NZV5 590 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 B3GAT1Q9P2W7 334 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 KCNN3Q9UGI6 736 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 MCTS1Q9ULC4 181 aaKnown RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 TRAPPC4Q9Y296 219 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SH3GLB1Q9Y371 365 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 FLVCR1Q9Y5Y0 555 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ANKHD1Q8IWZ3 2542 aaKnown RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 PLCE1Q9P212 2302 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 IGKV3D-15A0A087WSY6 115 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 A0A087WUJ7 227 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 IGKV1D-43A0A0B4J1Z2 117 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 A0A0B4J2E0 115 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 A0A1B0GX12 115 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 PRORSD1PA6NEY8 169 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZNF724A8MTY0 619 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 C17orf100A8MU93 164 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 A8MVM7 634 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 E7EQL1 145 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 C11orf98E9PRG8 122 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 FAAHO00519 579 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 KPNA4O00629 521 aaPredicted RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZNF208O43345 1280 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 RAD51DO75771 328 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SERPINI2O75830 405 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZNF432O94892 652 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 PMS2P2O95744 297 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CH25HO95992 272 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CD8AP01732 235 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CRHP06850 196 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SOD3P08294 240 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 TROVE2P10155 538 aaKnown RBP eCLIP3.68□□□□□ -1.82
SPG11-211ENST00000558561 FCGR2AP12318 317 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZNF26P17031 533 aaPredicted RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 ME2P23368 584 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ELK4P28324 431 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 GSK3BP49841 420 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZNF83P51522 516 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 RPS6KA3P51812 740 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SLC7A2P52569 658 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ART1P52961 327 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 UGT2B15P54855 530 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CLDN17P56750 224 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 RGS8P57771 180 aaPredicted RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 PSME3P61289 254 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SLC35A1P78382 337 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 HPCAP84074 193 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MS4A2Q01362 244 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 PPP1R8Q12972 351 aaKnown RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 ITGADQ13349 1161 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms