RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CT45A7P0DMV0 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CT45A8P0DMV1 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CT45A9P0DMV2 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 NAGAP17050 411 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 TGFBR3Q03167 851 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CT45A2Q5DJT8 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CT45A1Q5HYN5 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR13H1Q8NG92 308 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CT45A3Q8NHU0 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 TCTN2Q96GX1 697 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 TRIB1Q96RU8 372 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 NTNG1Q9Y2I2 539 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 H7BYZ3 331 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 YKT6O15498 198 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR2T7P0C7T2 308 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 DCDP81605 110 aaKnown RBP12.83□□□□□ -0.36
SPG11-210ENST00000558319 Q499Y3 187 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR51H1Q8NH63 302 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 PARD6AQ9NPB6 346 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 A0A1W2PRV1 198 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 M0R1B8 84 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 ZNF26P17031 533 aaPredicted RBP12.83□□□□□ -0.36
SPG11-210ENST00000558319 HIST1H1TP22492 207 aaPredicted RBP12.83□□□□□ -0.36
SPG11-210ENST00000558319 KCNJ10P78508 379 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 DGCR2P98153 550 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 GDPD3Q7L5L3 318 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 THNSL2Q86YJ6 484 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 NECAP2Q9NVZ3 263 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 IL17CQ9P0M4 197 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 SLC22A7Q9Y694 548 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 M0QZQ0 153 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 SSSCA1O60232 199 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 QDPRP09417 244 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 SEMA3BQ13214 749 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 Q6ZRG5 221 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 ZNF511Q8NB15 262 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 MAP6Q96JE9 813 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 ZCCHC4Q9H5U6 513 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR52A1Q9UKL2 312 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 FAM96BQ9Y3D0 163 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 J3QR89 54 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR2J3O76001 311 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 ABHD16AO95870 558 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CR2P20023 1033 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CCR9P51686 369 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 MYBPHQ13203 477 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 OR13D1Q8NGV5 346 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
SPG11-210ENST00000558319 GMLQ99445 158 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 PPP1R3CQ9UQK1 317 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 RFPL4AA6NLU0 287 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 RFPL4AL1F8VTS6 287 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 RRP8O43159 456 aaKnown RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 FAM157BP0CG42 384 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 TACR1P25103 407 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 ELAVL4P26378 380 aaKnown RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 ARNTP27540 789 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 ZNF93P35789 620 aaPredicted RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 KIR2DS3Q14952 304 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 Q1RN00 199 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 RPUSD3Q6P087 351 aaKnown RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 RXFP4Q8TDU9 374 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 LTB4R2Q9NPC1 389 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 DIMT1Q9UNQ2 313 aaKnown RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 UNCXA6NJT0 531 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 ALOX12BO75342 701 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 FABP4P15090 132 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 SPNP16150 400 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 IRS1P35568 1242 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 DEFB109BQ30KR1 87 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 PLA1AQ53H76 456 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 CORO6Q6QEF8 472 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 PLPPR2Q96GM1 343 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 LYSMD1Q96S90 227 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 GPR55Q9Y2T6 319 aaPredicted RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 FAM221AA4D161 298 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 HOXC11O43248 304 aaPredicted RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 SPINK2P20155 84 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 FOXK2Q01167 660 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 IFT22Q9H7X7 185 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 PRSS16Q9NQE7 514 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 UBQLN4Q9NRR5 601 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 ZNF354AO60765 605 aaPredicted RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 PCBP3P57721 371 aaKnown RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 FABP9Q0Z7S8 132 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 SNTB1Q13884 538 aaKnown RBP12.82□□□□□ -0.36
SPG11-210ENST00000558319 ZNF528Q3MIS6 628 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 HTR1FP30939 366 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 DMWDQ09019 674 aa12.82□□□□□ -0.36
SPG11-210ENST00000558319 FOXC1Q12948 553 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms