RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 ARFIP1P53367 373 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 IL10RAQ13651 578 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 UBXN2BQ14CS0 331 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 TMEM71Q6P5X7 295 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 ETV3LQ6ZN32 361 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 OR1J4Q8NGS1 313 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 GPR119Q8TDV5 335 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 ADOQ96SZ5 270 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 COMMD4Q9H0A8 199 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 MLXQ9UH92 298 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 MRPS18BQ9Y676 258 aaKnown RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 A0A0B4J2A0 478 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 SNRPGP15A8MWD9 76 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 K7EQS6 105 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 BET1O15155 118 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 ZNF254O75437 659 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 CT45A8P0DMV1 189 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 CT45A9P0DMV2 189 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 FAUP35544 74 aaKnown RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 MAP3K8P41279 467 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 EGR4Q05215 589 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 CT45A2Q5DJT8 189 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 EXOSC6Q5RKV6 272 aaKnown RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 ATPAF1Q5TC12 328 aaPredicted RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 MED25Q71SY5 747 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 LINC00518Q8N0U6 118 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 BPIFB2Q8N4F0 458 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 BCORP1Q8N888 145 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 CLRN3Q8NCR9 226 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 GPR148Q8TDV2 347 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 ZNF578Q96N58 590 aaPredicted RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 CMSS1Q9BQ75 279 aaKnown RBP11.14□□□□□ -0.63
LDLR-205ENST00000557933 SYNDIG1Q9H7V2 258 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 SHPKQ9UHJ6 478 aa11.14□□□□□ -0.63
LDLR-205ENST00000557933 SLC16A7O60669 478 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 NKX2-2O95096 273 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 ABHD16AO95870 558 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 SMIM10L1P0DMW3 83 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 S1PR1P21453 382 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 PLEKHN1Q494U1 663 aaPredicted RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 MANEAQ5SRI9 462 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 CLVS2Q5SYC1 327 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 CLEC1AQ8NC01 280 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 OR6N1Q8NGY5 312 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 SMIM10Q96HG1 83 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 OR11A1Q9GZK7 315 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 OR8D2Q9GZM6 311 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 PHF3Q92576 2039 aaKnown RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 KANTRA0A1W2PQU2 76 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 SERINC4A6NH21 518 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 OR2AT4A6NND4 320 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 SULT1C2O00338 296 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 CD34P28906 385 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 KCNJ3P48549 501 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 DHODHQ02127 395 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 HYAL1Q12794 435 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 BAMBIQ13145 260 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 TGIF1Q15583 401 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 RAB11BQ15907 218 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 ZNF684Q5T5D7 378 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 KRT77Q7Z794 578 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 TMEM151BQ8IW70 566 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 FAM160A2Q8N612 972 aaPredicted RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 ADAD2Q8NCV1 583 aaKnown RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 FGF14Q92915 247 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 TAAR8Q969N4 342 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 TM4SF19Q96DZ7 209 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 ZC3H10Q96K80 434 aaKnown RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 STACQ99469 402 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 NMNAT2Q9BZQ4 307 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 SELENOIQ9C0D9 397 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 CST11Q9H112 138 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 PNO1Q9NRX1 252 aaKnown RBP11.13□□□□□ -0.63
LDLR-205ENST00000557933 MBD2Q9UBB5 411 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 SLCO1B1Q9Y6L6 691 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 COL4A2P08572 1712 aa11.13□□□□□ -0.63
LDLR-205ENST00000557933 C5orf51A6NDU8 294 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 MPTX1A8MV57 137 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 IL5P05113 134 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 CD14P08571 375 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 TACR3P29371 465 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 CXADRP78310 365 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 PPP1R1AQ13522 171 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 GGTLC2Q14390 218 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 RBM39Q14498 530 aaKnown RBP11.12□□□□□ -0.63
LDLR-205ENST00000557933 TMEM196Q5HYL7 178 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 C16orf47Q6ZP98 133 aaPredicted RBP11.12□□□□□ -0.63
LDLR-205ENST00000557933 OR10R2Q8NGX6 335 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 KLK13Q9UKR3 277 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 TMEM184BQ9Y519 407 aaPredicted RBP11.12□□□□□ -0.63
LDLR-205ENST00000557933 URADA6NGE7 173 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 ABCD4O14678 606 aa11.12□□□□□ -0.63
LDLR-205ENST00000557933 HCRTR2O43614 444 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms