RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 NXNL2Q5VZ03 156 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 LPCAT4Q643R3 524 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC16A14Q7RTX9 510 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 DHRSXQ8N5I4 330 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SETD9Q8NE22 299 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 PROKR2Q8NFJ6 384 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC26A10Q8NG04 563 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 NSMAFQ92636 917 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 RFKQ969G6 155 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 APOL4Q9BPW4 351 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SEC61A2Q9H9S3 476 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 FAM118AQ9NWS6 357 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 H2AFY2Q9P0M6 372 aaPredicted RBP12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 ATPIF1Q9UII2 106 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 COA3Q9Y2R0 106 aaPredicted RBP12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 GMPPBQ9Y5P6 360 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 HSPE1-MOB4S4R3N1 261 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 ROS1P08922 2347 aa12.34□□□□□ -0.43
SUPT16H-208ENST00000557652 IGKV1D-43A0A0B4J1Z2 117 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 A0A1W2PPL8 197 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 A1L4Q6 167 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 SLC22A31A6NKX4 558 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 GLCEO94923 617 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 GAAP10253 952 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 EPHA2P29317 976 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 LRRC36Q1X8D7 754 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 HIKESHIQ53FT3 197 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 TMEM236Q5W0B7 351 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 TMEM108Q6UXF1 575 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 CPOQ8IVL8 374 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 ALDH16A1Q8IZ83 802 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 GALNT4Q8N4A0 578 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 CYB561A3Q8NBI2 242 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 OR10H5Q8NGA6 315 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 PTP4A1Q93096 173 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 Q96MT0 163 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 MARCH7Q9H992 704 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 CCNB1IP1Q9NPC3 277 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 HINT3Q9NQE9 182 aaKnown RBP12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 HAO2Q9NYQ3 351 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 CRIM1Q9NZV1 1036 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 TIMM10BQ9Y5J6 103 aa12.33□□□□□ -0.44
SUPT16H-208ENST00000557652 A0A096LPE4 126 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 DCTN6O00399 190 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 DLGAP1O14490 977 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 TLX2O43763 284 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 RAB36O95755 333 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 IGLV1-44P01699 117 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 THBDP07204 575 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 COX5BP10606 129 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 ZNF823P16415 610 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 POLR2IP36954 125 aaKnown RBP12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 TEKQ02763 1124 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 PLP2Q04941 152 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 POU4F2Q12837 409 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 TSC22D1Q15714 1073 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 SGCAQ16586 387 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 PCK2Q16822 640 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 PLBD1Q6P4A8 553 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 SEZ6L2Q6UXD5 910 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 RHOUQ7L0Q8 258 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 TCEANCQ8N8B7 351 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 OR52N5Q8NH56 324 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 LINC01560Q8TB33 94 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 FAM81AQ8TBF8 368 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 MBOAT4Q96T53 435 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 MNTQ99583 582 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 RERGLQ9H628 205 aa12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.44
SUPT16H-208ENST00000557652 FAM221AA4D161 298 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 PRKYO43930 277 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 SLC2A5P22732 501 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 SSTR2P30874 369 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 VHLP40337 213 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 CAPZA2P47755 286 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 RAB1AP62820 205 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 ETFDHQ16134 617 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 OCLNQ16625 522 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 ZIK1Q3SY52 487 aaPredicted RBP12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 LINC01590Q5TEZ4 76 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 AADACL4Q5VUY2 407 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 SHFQ7M4L6 423 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 C1orf174Q8IYL3 243 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 GJC3Q8NFK1 279 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 OR1J2Q8NGS2 313 aa12.31□□□□□ -0.44
SUPT16H-208ENST00000557652 TSSK2Q96PF2 358 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms