RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 HEXA-AS1Q9H8Q6 139 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ERVMER34-1Q9H9K5 563 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 GPN1Q9HCN4 374 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 C12orf4Q9NQ89 552 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SPHK2Q9NRA0 654 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZCCHC3Q9NUD5 404 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 IL20Q9NYY1 176 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF224Q9NZL3 707 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 IL36AQ9UHA7 158 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 MOSPD1Q9UJG1 213 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 BAIAP2Q9UQB8 552 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 RASD1Q9Y272 281 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM5Q9Y2B1 443 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PAM16Q9Y3D7 125 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 DOCK7Q96N67 2140 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 DOCK6Q96HP0 2047 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 TRAV6A0A075B6T7 132 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 IGLV5-52A0A0A0MRZ9 124 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 A0A1B0GUH1 482 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 C2orf92A0A1B0GVN3 265 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 A0A1W2PRG6 482 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 DUXAA6NLW8 204 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 NEDD8-MDP1E9PL57 170 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 J3QRE1 110 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF593O00488 134 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GPR171O14626 319 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PDCD5O14737 125 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 EMC8O43402 210 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SULT1B1O43704 296 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GATBO75879 557 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 RCBTB2O95199 551 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SCGB1D1O95968 90 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 CH25HO95992 272 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 EIF4EP06730 217 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SPARCP09486 303 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GIPP09681 153 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ERGP11308 486 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GNSP15586 552 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 CEBPBP17676 345 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 RAB3BP20337 219 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ACADLP28330 430 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PDHA2P29803 388 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SSR2P43308 183 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 TSFMP43897 325 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 NCBP2P52298 156 aaKnown RBP eCLIP4.21□□□□□ -1.745e-7■■■■□ 25.1
ATXN3-246ENST00000557030 RGS8P57771 180 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ACTA2P62736 377 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ACTG2P63267 376 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ADORA2A-AS1P86434 159 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 TGM3Q08188 693 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PUDPQ08623 228 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SNTB2Q13425 540 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 CAMK2DQ13557 499 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 LGALSLQ3ZCW2 172 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SLC36A2Q495M3 483 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PLPP4Q5VZY2 271 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 OR4C11Q6IEV9 310 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SLC30A6Q6NXT4 461 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 NIPAL3Q6P499 406 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 FAM198BQ6UWH4 519 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 WASH2PQ6VEQ5 465 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SHFQ7M4L6 423 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SZRD1Q7Z422 152 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 TRMT11Q7Z4G4 463 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ABI3BPQ7Z7G0 1075 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 RANBP3LQ86VV4 465 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SFTPA2Q8IWL1 248 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 CFAP206Q8IYR0 622 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 OR6V1Q8N148 313 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 HDDC3Q8N4P3 179 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ZFP41Q8N8Y5 198 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 OR4F15Q8NGB8 312 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 OR6T1Q8NGN1 323 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 OR5W2Q8NH69 310 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SPATA3Q8NHX4 192 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 HAVCR2Q8TDQ0 301 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 FAM216AQ8WUB2 273 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SMIM4Q8WVI0 70 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GIMAP1Q8WWP7 306 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SORCS1Q8WY21 1168 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 YIPF5Q969M3 257 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ERGIC1Q969X5 290 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 DTD2Q96FN9 168 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 MSANTD3Q96H12 275 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 LRFN5Q96NI6 719 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 AMDHD1Q96NU7 426 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GPA33Q99795 319 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PELOQ9BRX2 385 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF649Q9BS31 505 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 RAB11FIP5Q9BXF6 653 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF436Q9C0F3 470 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 OR2AG1Q9H205 316 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 GLIPR2Q9H4G4 154 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 C6orf106Q9H6K1 298 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PLEKHA1Q9HB21 404 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SLC35C2Q9NQQ7 365 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 NANSQ9NR45 359 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 SLCO1C1Q9NYB5 712 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 RDH8Q9NYR8 311 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms