RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 LAP3P28838 519 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 SDHAP31040 664 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 GALK2Q01415 458 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 TRIM25Q14258 630 aaKnown RBP19.48■□□□□ 0.71
PABPN1-207ENST00000556821 MTX3Q5HYI7 312 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 PABPC1L2AQ5JQF8 200 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 CLEC2AQ6UVW9 174 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 BCAS4Q8TDM0 211 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 CLPTM1LQ96KA5 538 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 VRK1Q99986 396 aaPredicted RBP19.48■□□□□ 0.71
PABPN1-207ENST00000556821 RHNO1Q9BSD3 238 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 NDEL1Q9GZM8 345 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 C1orf21Q9H246 121 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 C1orf198Q9H425 327 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 CMAHPQ9Y471 501 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 SPEF1Q9Y4P9 236 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 TANC2Q9HCD6 1990 aa19.48■□□□□ 0.71
PABPN1-207ENST00000556821 A0A1W2PPL8 197 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 PRSS37A4D1T9 235 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 IMPA2O14732 288 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 SCG5P05408 212 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 CTLA4P16410 223 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 ENDOGQ14249 297 aaKnown RBP19.47■□□□□ 0.71
PABPN1-207ENST00000556821 GPR139Q6DWJ6 353 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 TRPM8Q7Z2W7 1104 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 DHFR2Q86XF0 187 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 ZCCHC24Q8N2G6 241 aaKnown RBP19.47■□□□□ 0.71
PABPN1-207ENST00000556821 C10orf105Q8TEF2 133 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 LYVE1Q9Y5Y7 322 aa19.47■□□□□ 0.71
PABPN1-207ENST00000556821 VSTM5A8MXK1 200 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 SOCS2O14508 198 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 XKRYO14609 159 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 AHCYL1O43865 530 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 OR10H3O60404 316 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 FAM157BP0CG42 384 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 FPR3P25089 353 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 GSSP48637 474 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 DSCR9P59020 149 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 PSG4Q00888 419 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 HSF2Q03933 536 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 PLP2Q04941 152 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 C1orf94Q6P1W5 598 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 SMARCD3Q6STE5 483 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 DPY19L2P2Q6ZN68 376 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 PTCHD4Q6ZW05 846 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 LRP11Q86VZ4 500 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 FANK1Q8TC84 345 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 FAM168AQ92567 244 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 SYT3Q9BQG1 590 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 SYT4Q9H2B2 425 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 KCNN2Q9H2S1 579 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 OR52D1Q9H346 318 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 CDH20Q9HBT6 801 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 CCNB1IP1Q9NPC3 277 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 POLE4Q9NR33 117 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 MYEF2Q9P2K5 600 aaKnown RBP19.46■□□□□ 0.71
PABPN1-207ENST00000556821 IER3IP1Q9Y5U9 82 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 FKBP7Q9Y680 259 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.46■□□□□ 0.711e-12■■■■□ 19.6
PABPN1-207ENST00000556821 MXRA5Q9NR99 2828 aa19.46■□□□□ 0.71
PABPN1-207ENST00000556821 IQCMA0A1B0GVH7 501 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 UBOX5O94941 541 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 PPP1R3DO95685 299 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 TXNDC12O95881 172 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 CST2P09228 141 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 MSR1P21757 451 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 HMGA2P52926 109 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 ERVS71-1P61550 626 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 RPS23P62266 143 aaKnown RBP19.45■□□□□ 0.7
PABPN1-207ENST00000556821 TBC1D28Q2M2D7 210 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 PGBD2Q6P3X8 592 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 UGT2A3Q6UWM9 527 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 OR4C15Q8NGM1 316 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 AKR7LQ8NHP1 331 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 CCDC124Q96CT7 223 aaKnown RBP19.45■□□□□ 0.7
PABPN1-207ENST00000556821 ASB9Q96DX5 294 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 ZNF416Q9BWM5 594 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 OR2H1Q9GZK4 316 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 WNT5BQ9H1J7 359 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 OR51B6Q9H340 312 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 MAGIXQ9H6Y5 334 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 EMC7Q9NPA0 242 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 VSX1Q9NZR4 365 aaPredicted RBP19.45■□□□□ 0.7
PABPN1-207ENST00000556821 FZR1Q9UM11 496 aa19.45■□□□□ 0.7
PABPN1-207ENST00000556821 LOC100509620A0A075B734 347 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 PTHP01270 115 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 CSF3P09919 207 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 APEHP13798 732 aaKnown RBP19.44■□□□□ 0.7
PABPN1-207ENST00000556821 EVX1P49640 407 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 RFX4Q33E94 735 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 ADCK1Q86TW2 530 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 POM121L2Q96KW2 1035 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 FOXN4Q96NZ1 517 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 BTBD10Q9BSF8 475 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 DYNLRB1Q9NP97 96 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 VNN3Q9NY84 501 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 FBXO9Q9UK97 447 aaPredicted RBP19.44■□□□□ 0.7
PABPN1-207ENST00000556821 TMCC3Q9ULS5 477 aa19.44■□□□□ 0.7
PABPN1-207ENST00000556821 VWC2LB2RUY7 222 aa19.43■□□□□ 0.7
PABPN1-207ENST00000556821 ACOT8O14734 319 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms