RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 OR8G3PP0DMU2 310 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 BMP4P12644 408 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 RHCEP18577 417 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 NPR2P20594 1047 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 PCSK6P29122 969 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 MAGEA2P43356 314 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 GPR4P46093 362 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 LIMS1P48059 325 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 TBPL2Q6SJ96 375 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 ZBTB49Q6ZSB9 765 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 GALNT4Q8N4A0 578 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 PAQR4Q8N4S7 273 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-224ENST00000556737 CLDN22Q8N7P3 220 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 IL17RDQ8NFM7 739 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 OR5K1Q8NHB7 308 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 SLC7A13Q8TCU3 470 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 FAM168AQ92567 244 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 DHRS1Q96LJ7 313 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 DOK1Q99704 481 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 RHNO1Q9BSD3 238 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 FUZQ9BT04 418 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 MRPL37Q9BZE1 423 aaKnown RBP8.9□□□□□ -0.98
SHMT2-224ENST00000556737 NMNAT1Q9HAN9 279 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-224ENST00000556737 SMURF2Q9HAU4 748 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 NDUFAF4Q9P032 175 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 FBXL3Q9UKT7 428 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 TMCC3Q9ULS5 477 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 OAZ3Q9UMX2 235 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 FKBP7Q9Y680 259 aa8.9□□□□□ -0.98
SHMT2-224ENST00000556737 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.99
SHMT2-224ENST00000556737 SVEP1Q4LDE5 3571 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 A0A1W2PRQ8 180 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 EFCAB9A8MZ26 197 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 G3V2T6 193 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 CD5LO43866 347 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SERPINA5P05154 406 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 H1F0P07305 194 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 CSF3P09919 207 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SAGP10523 405 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SLC25A16P16260 332 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 CDAP32320 146 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SLC9A3P48764 834 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ZNF84P51523 738 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SMIM11AP58511 58 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 RPL27P61353 136 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 MRPS34P82930 218 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 LOXL1Q08397 574 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 DGCR6Q14129 220 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 TAF11Q15544 211 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 TMEM249Q2WGJ8 235 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ANKDD1AQ495B1 522 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 PODNL1Q6PEZ8 512 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SLC25A47Q6Q0C1 308 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ZNF730Q6ZMV8 503 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 FOXL2NBQ6ZUU3 175 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 TMPRSS11FQ6ZWK6 438 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SLC16A14Q7RTX9 510 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 FAM122BQ7Z309 247 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 OAFQ86UD1 273 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 HIPK1Q86Z02 1210 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ZDHHC13Q8IUH4 622 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 RNF113BQ8IZP6 322 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 CBR4Q8N4T8 237 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 OR51A7Q8NH64 312 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 NRG4Q8WWG1 115 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 MRPL24Q96A35 216 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 TNFRSF13CQ96RJ3 184 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ALG12Q9BV10 488 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 VNN3Q9NY84 501 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 PDP1Q9P0J1 537 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 MYEF2Q9P2K5 600 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ZNF346Q9UL40 294 aaKnown RBP8.89□□□□□ -0.99
SHMT2-224ENST00000556737 ABCA2Q9BZC7 2435 aa8.89□□□□□ -0.99
SHMT2-224ENST00000556737 SONP18583 2426 aaKnown RBP8.88□□□□□ -0.99
SHMT2-224ENST00000556737 TRBV4-1A0A0J9YWV2 114 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 H7C1C5 153 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 CASQ2O14958 399 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-224ENST00000556737 CCNB2O95067 398 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 FARS2O95363 451 aaKnown RBP8.88□□□□□ -0.99
SHMT2-224ENST00000556737 SNAP29O95721 258 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 GLRXP35754 106 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 OMPP47874 163 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 PDLIM4P50479 330 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 FXYD6P3P58550 94 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 CTXN1P60606 82 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 LCN6P62502 163 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 CD47Q08722 323 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 SEC23BQ15437 767 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 MESTQ5EB52 335 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 OGFRL1Q5TC84 451 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-224ENST00000556737 FAM205BPQ63HN1 556 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 IZUMO2Q6UXV1 221 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 RRM2BQ7LG56 351 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 DPPA2Q7Z7J5 298 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 ZCCHC24Q8N2G6 241 aaKnown RBP8.88□□□□□ -0.99
SHMT2-224ENST00000556737 ATG16L2Q8NAA4 619 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 SLC30A7Q8NEW0 376 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 FAM46AQ96IP4 442 aaKnown RBP8.88□□□□□ -0.99
SHMT2-224ENST00000556737 VRK1Q99986 396 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms