RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TNIKQ9UKE5 1360 aa2.59□□□□□ -2
SCFD1-221ENST00000556534 IGKV6-21A0A0C4DH24 114 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 SMCO2A6NFE2 343 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 ERVV-1B6SEH8 477 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 PEX7O00628 323 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 SLC31A2O15432 143 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 CD5LO43866 347 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 AIREO43918 545 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 C2P06681 752 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 ZNF823P16415 610 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 IGFBP3P17936 291 aaPredicted RBP2.58□□□□□ -2
SCFD1-221ENST00000556534 RORAP35398 523 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 ZNF136P52737 540 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 FGF8P55075 233 aaPredicted RBP2.58□□□□□ -2
SCFD1-221ENST00000556534 SGCAQ16586 387 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 TMEM183BQ1AE95 376 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 FAM83EQ2M2I3 478 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 C9orf135Q5VTT2 229 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 TTC19Q6DKK2 380 aaPredicted RBP2.58□□□□□ -2
SCFD1-221ENST00000556534 C22orf42Q6IC83 251 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 LYPD2Q6UXB3 125 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 CERS6Q6ZMG9 384 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 LHFPL3Q86UP9 236 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 PLA2G4DQ86XP0 818 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 TMEM183AQ8IXX5 376 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 ZNF561Q8N587 486 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 FNDC5Q8NAU1 212 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 HSD17B11Q8NBQ5 300 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 OR10G2Q8NGC3 310 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 OR2G2Q8NGZ5 317 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 MCOLN3Q8TDD5 553 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 C8orf44Q96CB5 159 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 CCDC126Q96EE4 140 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 HSFY1Q96LI6 401 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 IQCGQ9H095 443 aaKnown RBP2.58□□□□□ -2
SCFD1-221ENST00000556534 CYP3A43Q9HB55 503 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 FANCEQ9HB96 536 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 GPATCH2LQ9NWQ4 482 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 LYARQ9NX58 379 aaKnown RBP2.58□□□□□ -2
SCFD1-221ENST00000556534 XCL2Q9UBD3 114 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 RHBDD3Q9Y3P4 386 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 N6AMT1Q9Y5N5 214 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 MROH5Q6ZUA9 1318 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 CNTNAP1P78357 1384 aa2.58□□□□□ -2
SCFD1-221ENST00000556534 TRBV9A0A0B4J1U6 114 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 LRRIQ3A6PVS8 624 aaPredicted RBP2.57□□□□□ -2
SCFD1-221ENST00000556534 SIRPB1O00241 398 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 PPP1R2P9O14990 202 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 MRPS12O15235 138 aaKnown RBP2.57□□□□□ -2
SCFD1-221ENST00000556534 MED6O75586 246 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 CLPXO76031 633 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 ERLIN2O94905 339 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 BCKDHBP21953 392 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 RRM2P31350 389 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 ERVK-25P63136 954 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 MOBPQ13875 183 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 GUCA2BQ16661 112 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 MMAAQ8IVH4 418 aaKnown RBP2.57□□□□□ -2
SCFD1-221ENST00000556534 ZNF695Q8IW36 515 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 OR1N2Q8NGR9 330 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 GPX8Q8TED1 209 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 STMN2Q93045 179 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 RARRES2Q99969 163 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 C8orf33Q9H7E9 229 aaPredicted RBP2.57□□□□□ -2
SCFD1-221ENST00000556534 CALYQ9NYX4 217 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 FANCIQ9NVI1 1328 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 PIKFYVEQ9Y2I7 2098 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 AKNAQ7Z591 1439 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 KIF27Q86VH2 1401 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 SLIT3O75094 1523 aa2.57□□□□□ -2
SCFD1-221ENST00000556534 KCNE1BA0A087WTH5 132 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 IGKV1D-13A0A0B4J2D9 117 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 KBTBD11-OT1A0A1B0GTJ5 212 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 A0A1W2PQ67 120 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 PLAC8L1A1L4L8 177 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 GABRR3A8MPY1 467 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 NDUFAB1O14561 156 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 AIM2O14862 343 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 SOX15O60248 233 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 EIF4E2O60573 245 aaKnown RBP2.56□□□□□ -2
SCFD1-221ENST00000556534 HUS1O60921 280 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 CLIC3O95833 236 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 ALDOBP05062 364 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 IGHV3-43DP0DP04 118 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 IGKV1-13P0DP09 117 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 MYL2P10916 166 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 FOLR1P15328 257 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 SRMP19623 302 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 CPN2P22792 545 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 AQP2P41181 271 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 CRISP1P54107 249 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 FZD2Q14332 565 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 PPM1LQ5SGD2 360 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 PLCXD3Q63HM9 321 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 TWF2Q6IBS0 349 aaKnown RBP2.56□□□□□ -2
SCFD1-221ENST00000556534 FAM71E1Q6IPT2 247 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 LCN12Q6JVE5 192 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 ABHD12BQ7Z5M8 362 aaPredicted RBP2.56□□□□□ -2
SCFD1-221ENST00000556534 PCP2Q8IVA1 136 aa2.56□□□□□ -2
SCFD1-221ENST00000556534 MICU2Q8IYU8 434 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms