RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ARHGDIAP52565 204 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 RGNQ15493 299 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 NRN1LQ496H8 165 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 TTMPQ5BVD1 217 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 DHRS4L2Q6PKH6 230 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 ZNF620Q6ZNG0 422 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 HIST3H2AQ7L7L0 130 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 ZER1Q7Z7L7 766 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-219ENST00000556432 KIRREL3Q8IZU9 778 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 NOXO1Q8NFA2 376 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 NFKBIDQ8NI38 313 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 ITLN1Q8WWA0 313 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 RAB40AQ8WXH6 277 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 HIST1H2ACQ93077 130 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 PLEKHA8Q96JA3 519 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 POM121L2Q96KW2 1035 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 ZNF347Q96SE7 839 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 SPATA5L1Q9BVQ7 753 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 C20orf27Q9GZN8 174 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 RAD21L1Q9H4I0 556 aa11.67□□□□□ -0.54
ACTN1-219ENST00000556432 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.67□□□□□ -0.54
ACTN1-219ENST00000556432 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-219ENST00000556432 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-219ENST00000556432 LOC100509620A0A075B734 347 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 H3BSA7 217 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-219ENST00000556432 TPST1O60507 370 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 ZNF205O95201 554 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 UMPSP11172 480 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 ZNF32P17041 273 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 CDAP32320 146 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 SGCAQ16586 387 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 RUSC1-AS1Q66K80 236 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 NXNQ6DKJ4 435 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 Q6YL49 198 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 C1orf174Q8IYL3 243 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 POU5F2Q8N7G0 328 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 NUDT16L1Q9BRJ7 211 aaKnown RBP11.66□□□□□ -0.54
ACTN1-219ENST00000556432 NANSQ9NR45 359 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 PNPOQ9NVS9 261 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 TAS2R5Q9NYW4 299 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 KIF17Q9P2E2 1029 aa11.66□□□□□ -0.54
ACTN1-219ENST00000556432 G3V4G9 280 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SDHDO14521 159 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SURF4O15260 269 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SLC22A3O75751 556 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 MELTFP08582 738 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 WNT2P09544 360 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 CSF1P09603 554 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 THRBP10828 461 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 GSTM3P21266 225 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 ETV4P43268 484 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 PCBP3P57721 371 aaKnown RBP11.65□□□□□ -0.54
ACTN1-219ENST00000556432 FGF12P61328 243 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 ERVK-25P63136 954 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 PAX2Q02962 417 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 FADDQ13158 208 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 FAM189A2Q15884 450 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 ZNF74Q16587 644 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SWT1Q5T5J6 900 aaKnown RBP11.65□□□□□ -0.54
ACTN1-219ENST00000556432 Q6ZPA2 131 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 NLRC3Q7RTR2 1065 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 NANOGNBQ7Z5D8 188 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 KLBQ86Z14 1044 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 TMEM86BQ8N661 226 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 LINC01006Q8NI28 216 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SSMEM1Q8WWF3 244 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SIGLEC11Q96RL6 698 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SORT1Q99523 831 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 RSPO3Q9BXY4 272 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-219ENST00000556432 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 SIAEQ9HAT2 523 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 LGALS13Q9UHV8 139 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 KLHL21Q9UJP4 597 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
ACTN1-219ENST00000556432 A0A1W2PRG6 482 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 PRORSD1PA6NEY8 169 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 BLOC1S5-TXNDC5H3BN57 136 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 TMEM178BH3BS89 294 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 CLIC1O00299 241 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 PIP5K1CO60331 668 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 GPR137BO60478 399 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 CLPXO76031 633 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 SLC2A10O95528 541 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 EPHA3P29320 983 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 AQP1P29972 269 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 PSG7Q13046 419 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 RUNDC3AQ59EK9 446 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 GCNT6Q5T4J0 391 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 HHATQ5VTY9 493 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 REEP3Q6NUK4 255 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 ZNF774Q6NX45 483 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 SLC27A4Q6P1M0 643 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms