RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 SLC16A6O15403 523 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 WNT11O96014 354 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 THBDP07204 575 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 FMO3P31513 532 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 CAPGP40121 348 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF83P51522 516 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 HSF2Q03933 536 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 KEAP1Q14145 624 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 C6orf52Q5T4I8 152 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 SP5Q6BEB4 398 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF627Q7L945 461 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 DMRTC2Q8IXT2 367 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF511Q8NB15 262 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 PSMG3-AS1Q96PY0 264 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF416Q9BWM5 594 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 CCNB1IP1Q9NPC3 277 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 PLEKHB1Q9UF11 243 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 SLC25A15Q9Y619 301 aa12.27□□□□□ -0.44
VIPAS39-208ENST00000556412 TFP02787 698 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 GAAP10253 952 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 ZNF823P16415 610 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 ADAM8P78325 824 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 TEKQ02763 1124 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 GSG1Q2KHT4 349 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 SLC36A2Q495M3 483 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 NRN1LQ496H8 165 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 FAM27BQ5VT28 67 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 MDP1Q86V88 176 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 ENTHD1Q8IYW4 607 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 SLC26A10Q8NG04 563 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 DACH2Q96NX9 599 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 CDADC1Q9BWV3 514 aa12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 USP9XQ93008 2570 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-208ENST00000556412 ARPC4-TTLL3A0A0A6YYG9 625 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 M0R1B8 84 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 PRODHO43272 600 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 GLCEO94923 617 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 UBL3O95164 117 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 RAB36O95755 333 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 COX6B1P14854 86 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 IGFBP2P18065 325 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 GSTT1P30711 240 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 CDH11P55287 796 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 RAB1AP62820 205 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 ADARB1P78563 741 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 EFNB1P98172 346 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 ENDOGQ14249 297 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 NXNL2Q5VZ03 156 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 ERI1Q8IV48 349 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 CCDC36Q8IYA8 594 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 TRUB1Q8WWH5 349 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 WDR76Q9H967 626 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 NOX3Q9HBY0 568 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 OBP2BQ9NPH6 170 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 ZNF224Q9NZL3 707 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 ASH2LQ9UBL3 628 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 MOKQ9UQ07 419 aa12.26□□□□□ -0.45
VIPAS39-208ENST00000556412 DOPEY1Q5JWR5 2465 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 GCN1Q92616 2671 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 C12orf71A8MTZ7 269 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 E9PQ18 207 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 MRPL3P09001 348 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 CST2P09228 141 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 GNAO1P09471 354 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 SPARCP09486 303 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 NAA10P41227 235 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 RPS27P42677 84 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 IDH3GP51553 393 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 LCN1P1Q5VSP4 162 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 AADACL4Q5VUY2 407 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 TMEM53Q6P2H8 277 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 CORO6Q6QEF8 472 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 LINC00346Q8IVM7 164 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 GID4Q8IVV7 300 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 SETD9Q8NE22 299 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 ZNF582Q96NG8 517 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 MRPL22Q9NWU5 206 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 COMMD3-BMI1R4GMX3 469 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 HELZ2Q9BYK8 2649 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 H0YAE9 185 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 H0YJX3 145 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 MPZL2O60487 215 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 ENTPD6O75354 484 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 EPXP11678 715 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 ZNF32P17041 273 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 SLC2A5P22732 501 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 BLVRAP53004 296 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 PCBD1P61457 104 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 SLC35D3Q5M8T2 416 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 LINC01590Q5TEZ4 76 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 ZNF691Q5VV52 312 aa12.25□□□□□ -0.45
VIPAS39-208ENST00000556412 MEPCEQ7L2J0 689 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms