RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GLSO94925 669 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 DEFB133Q30KQ1 61 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 KDM8Q8N371 416 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR5D18Q8NGL1 313 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC19A3Q9BZV2 496 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 NRSN2Q9GZP1 204 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR5V1Q9UGF6 321 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 PAPPA2Q9BXP8 1791 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 MAP2K6P52564 334 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 PDZK1IP1Q13113 114 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 TMEM88Q6PEY1 159 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZFP82Q8N141 532 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR4N2Q8NGD1 307 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC6A18Q96N87 628 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 IGHG1P01857 330 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 CHATP28329 748 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 HNRNPKP61978 463 aaKnown RBP eCLIP13.69□□□□□ -0.224e-7■■□□□ 12.5
ARHGEF40-207ENST00000556399 OR10K2Q6IF99 312 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 SUMF2Q8NBJ7 301 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 BAHD1Q8TBE0 780 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 NT5CQ8TCD5 201 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 FOSL2P15408 326 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 DRD1P21728 446 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 TNFRSF4P43489 277 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SNRPNP63162 240 aaKnown RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SFRP5Q5T4F7 317 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ANGPTL5Q86XS5 388 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 CLRN3Q8NCR9 226 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 C2CD4CQ8TF44 421 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 CCNL2Q96S94 520 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 MAP3K3Q99759 626 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 NAA11Q9BSU3 229 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 JAM3Q9BX67 310 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 CNTNAP3Q9BZ76 1288 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 PRMT8Q9NR22 394 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 C1orf123Q9NWV4 160 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLCO1C1Q9NYB5 712 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 KLK3P07288 261 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 PPP1R1CQ8WVI7 109 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SPTSSAQ969W0 71 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLAMF9Q96A28 289 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 LINC00052Q96N35 136 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 FAM212BQ9NTI7 297 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ELF5Q9UKW6 265 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 A8MVM7 634 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 BHLHE40O14503 412 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ACKR1Q16570 336 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ARIH2OSQ8N7S6 290 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 C16orf52Q8NHV5 167 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 GPR137Q96N19 417 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 TMEM231Q9H6L2 316 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF304Q9HCX3 659 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 FAM230AA0A1W2PPH8 454 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 RFPL4AA6NLU0 287 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 MCRIP1C9JLW8 97 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 RFPL4AL1F8VTS6 287 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 MT-ATP6P00846 226 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 SERPINF1P36955 418 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 PRSS53Q2L4Q9 553 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF626Q68DY1 528 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 MUC20Q8N307 709 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 TEX19Q8NA77 164 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR10Z1Q8NGY1 313 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 BORCS8Q96FH0 119 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF768Q9H5H4 540 aaKnown RBP13.68□□□□□ -0.22
ARHGEF40-207ENST00000556399 PSMB6P28072 239 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 IL10RAQ13651 578 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF695Q8IW36 515 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 PTP4A1Q93096 173 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 PLEK2Q9NYT0 353 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 C7orf66A4D0T2 115 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 GSTZ1O43708 216 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 MLF2Q15773 248 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 STK11Q15831 433 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 IAH1Q2TAA2 248 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 GLIPR1L1Q6UWM5 242 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR1J2Q8NGS2 313 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 RPH3AQ9Y2J0 694 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 WIF1Q9Y5W5 379 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 PCM1Q15154 2024 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 SULT2B1O00204 365 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 LCATP04180 440 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 BIDP55957 195 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 BTG2P78543 158 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC17A1Q14916 467 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 ASB13Q8WXK3 278 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 NICN1Q9BSH3 213 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 C8orf33Q9H7E9 229 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR5K3A6NET4 321 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 HSD17B7P56937 341 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 C5orf46Q6UWT4 87 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms